RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 CBSP35520 551 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 CCNFP41002 786 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 ABCG1P45844 678 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 CAPZBP47756 277 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 LIMK2P53671 638 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 SLC12A2P55011 1212 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 GPX6P59796 221 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 NAB1Q13506 487 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 TRA2AQ13595 282 aaKnown RBP eCLIP11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 KYNUQ16719 465 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 KLHL38Q2WGJ6 581 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 ACSBG2Q5FVE4 666 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 HECTD2Q5U5R9 776 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 LRRC8EQ6NSJ5 796 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 IRGCQ6NXR0 463 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 FOXR1Q6PIV2 292 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 AMIGO1Q86WK6 493 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 RELL1Q8IUW5 271 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 DCUN1D3Q8IWE4 304 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 PPM1NQ8N819 430 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 OR52E1Q8NGJ3 308 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 FBF1Q8TES7 1133 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 ELMO2Q96JJ3 720 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 TGM7Q96PF1 710 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 CMKLR1Q99788 373 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 SEMA6CQ9H3T2 930 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 TFB2MQ9H5Q4 396 aaKnown RBP11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 GALPQ9UBC7 116 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 KLHL3Q9UH77 587 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 VWA7Q9Y334 891 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 AK5Q9Y6K8 562 aa11.76□□□□□ -0.53
CSNK1E-213ENST00000495232 CCDC187A0A096LP49 1063 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 IGHV5-10-1A0A0J9YXX1 117 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 FAM95CA0A1B0GW59 222 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 GSAPA4D1B5 854 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 OR6C74A6NCV1 312 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 FAM159BA6NKW6 160 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 A8MU76 341 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 MATN2O00339 956 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 PIAS1O75925 651 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 ACSL3O95573 720 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 JMJD7P0C870 316 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 MCM3P25205 808 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 MAP4P27816 1152 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 ECHS1P30084 290 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 CSF2RBP32927 897 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 CSTF2P33240 577 aaKnown RBP eCLIP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 SPRP35270 261 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 GP5P40197 560 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 ZFP36L1Q07352 338 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 EIF3IQ13347 325 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 KBTBD12Q3ZCT8 623 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 C3orf38Q5JPI3 329 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 RBM20Q5T481 1227 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 GRTP1Q5TC63 336 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 ZNF574Q6ZN55 896 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 NEK10Q6ZWH5 1172 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 RAB11FIP2Q7L804 512 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 TMPRSS9Q7Z410 1059 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 B3GNT8Q7Z7M8 397 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 ZC3HC1Q86WB0 502 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 SLITRK4Q8IW52 837 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 CPNE9Q8IYJ1 553 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 WDR36Q8NI36 951 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 CD200R1Q8TD46 325 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 RSC1A1Q92681 617 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 RAD51AP1Q96B01 352 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 NXPE2Q96DL1 559 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 LIN37Q96GY3 246 aaPredicted RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 VPS39Q96JC1 886 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 CCDC74BQ96LY2 380 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 CYTH2Q99418 400 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 NRSN2Q9GZP1 204 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 CDC42EP4Q9H3Q1 356 aaKnown RBP11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 RHOJQ9H4E5 214 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 NINJ2Q9NZG7 142 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 OGFRQ9NZT2 677 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 SLC39A10Q9ULF5 831 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 PSAT1Q9Y617 370 aa11.75□□□□□ -0.53
CSNK1E-213ENST00000495232 PABPN1LA6NDY0 278 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 OR5K3A6NET4 321 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 TRABD2BA6NFA1 517 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 CXorf49A8MYA2 514 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 AGRPO00253 132 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 EIF3FO00303 357 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 HGSO14964 777 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 MAP3K7O43318 606 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 ZBTB14O43829 449 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 CATP04040 527 aaKnown RBP11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 MPC1LP0DKB6 136 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 THRAP10827 490 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 POLR2CP19387 275 aaPredicted RBP11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 CD9P21926 228 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 PDX1P52945 283 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 CDKN2DP55273 166 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 IL2P60568 153 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 GABREP78334 506 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 CFHR1Q03591 330 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 GBX1Q14549 363 aa11.74□□□□□ -0.53
CSNK1E-213ENST00000495232 CACHD1Q5VU97 1274 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms