RNA–Protein interactions for RNA: ENST00000494973.1

APTX-231, Transcript of aprataxin, human

TSL 4

Gene APTX, Length 547 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-231	ENST00000494973	MYL2	P10916	166 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	AK4	P27144	223 aa	Predicted RBP	13.22	□□□□□ -0.29
APTX-231	ENST00000494973	PDHA2	P29803	388 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	GLRB	P48167	497 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	DLG1	Q12959	904 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	SUZ12	Q15022	739 aa	Known RBP	13.22	□□□□□ -0.29
APTX-231	ENST00000494973	TSN	Q15631	228 aa	Known RBP	13.22	□□□□□ -0.29
APTX-231	ENST00000494973	HLA-B	Q31612	363 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	PLA2G2C	Q5R387	149 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	HHAT	Q5VTY9	493 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	METTL2B	Q6P1Q9	378 aa	Known RBP	13.22	□□□□□ -0.29
APTX-231	ENST00000494973	NAPRT	Q6XQN6	538 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	CYHR1	Q6ZMK1	362 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	VRK3	Q8IV63	474 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	TRIM42	Q8IWZ5	723 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	HOMEZ	Q8IX15	550 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	PLD6	Q8N2A8	252 aa	Known RBP	13.22	□□□□□ -0.29
APTX-231	ENST00000494973	OR5K2	Q8NHB8	316 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	MAPK15	Q8TD08	544 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	SH3KBP1	Q96B97	665 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	RMDN2	Q96LZ7	410 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	GPR78	Q96P69	363 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	GAREM1	Q9H706	876 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	IMP3	Q9NV31	184 aa	Known RBP	13.22	□□□□□ -0.29
APTX-231	ENST00000494973	TMEM216	Q9P0N5	145 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	SPATA7	Q9P0W8	599 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	TBC1D29	Q9UFV1	150 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	KLF15	Q9UIH9	416 aa		13.22	□□□□□ -0.29
APTX-231	ENST00000494973	PNMA8B	Q9ULN7	279 aa	Predicted RBP	13.22	□□□□□ -0.29
APTX-231	ENST00000494973	SDK1	Q7Z5N4	2213 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	SUPT3H	B4E1H0	165 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	SCAMP1	O15126	338 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	BIRC5	O15392	142 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	ZW10	O43264	779 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	PCDHGA12	O60330	932 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	SUPT3H	O75486	399 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	IPO13	O94829	963 aa	Known RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	LMNA	P02545	664 aa	Known RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	PROC	P04070	461 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	XRCC1	P18887	633 aa	Predicted RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	ATP5F1	P24539	256 aa	Predicted RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	RPL10	P27635	214 aa	Known RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	RPA3	P35244	121 aa	Predicted RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	RPIA	P49247	311 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	NFKB2	Q00653	900 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	IL9R	Q01113	521 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	ABR	Q12979	859 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	BIRC2	Q13490	618 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	ARHGAP19	Q14CB8	494 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	RPE65	Q16518	533 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	SULT1C3	Q6IMI6	304 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	SBSN	Q6UWP8	590 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	ZYG11A	Q6WRX3	759 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	NRROS	Q86YC3	692 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	RASGRP3	Q8IV61	690 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	SUMF1	Q8NBK3	374 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	PDPR	Q8NCN5	879 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	FAM46D	Q8NEK8	389 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	ZDHHC1	Q8WTX9	485 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	CCDC138	Q96M89	665 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	FAM111A	Q96PZ2	611 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	ATOH8	Q96SQ7	321 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	TCEAL2	Q9H3H9	227 aa	Predicted RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	ARL15	Q9NXU5	204 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	NLGN3	Q9NZ94	848 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	NCDN	Q9UBB6	729 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	LNPEP	Q9UIQ6	1025 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	PSMD13	Q9UNM6	376 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	PCDHGB2	Q9Y5G2	931 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	TNPO3	Q9Y5L0	923 aa	Known RBP	13.21	□□□□□ -0.29
APTX-231	ENST00000494973	PCDH15	Q96QU1	1955 aa		13.21	□□□□□ -0.29
APTX-231	ENST00000494973	FAM221B	A6H8Z2	402 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	ARHGEF33	A8MVX0	844 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	FOXO6	A8MYZ6	492 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973		H3BQF6	201 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	STX16-NPEPL1	H3BU86	382 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	TK2	O00142	265 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	MYO1C	O00159	1063 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	CDC7	O00311	574 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	STX16	O14662	325 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	FFAR2	O15552	330 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	SNUPN	O95149	360 aa	Known RBP	13.2	□□□□□ -0.3
APTX-231	ENST00000494973	C1orf105	O95561	183 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	VIP	P01282	170 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	ZNF806	P0C7X5	589 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	GFAP	P14136	432 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	CPA3	P15088	417 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	ENG	P17813	658 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	CCND1	P24385	295 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	OAS2	P29728	719 aa	Known RBP	13.2	□□□□□ -0.3
APTX-231	ENST00000494973	PIK3CG	P48736	1102 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	PGGT1B	P53609	377 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	ALDH18A1	P54886	795 aa	Known RBP	13.2	□□□□□ -0.3
APTX-231	ENST00000494973	IRX4	P78413	519 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	BNC1	Q01954	994 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	C1orf61	Q13536	156 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	TGFBI	Q15582	683 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	PPP1R3A	Q16821	1122 aa		13.2	□□□□□ -0.3
APTX-231	ENST00000494973	C6orf132	Q5T0Z8	1188 aa		13.2	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms