RNA–Protein interactions for RNA: ENST00000494623.1

CHMP3-209, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2

Gene CHMP3, Length 2,724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-209ENST00000494623 ANXA5P08758 320 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 SLC5A2P31639 672 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 AKT1P31749 480 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ALDH3B2P48448 385 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 SH3BGRP55822 239 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ARHGEF6Q15052 776 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 PLCL1Q15111 1095 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 CRY1Q16526 586 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ZIK1Q3SY52 487 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 SLC44A4Q53GD3 710 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 CACHD1Q5VU97 1274 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 AP1ARQ63HQ0 302 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 BORAQ6PGQ7 559 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 TPRG1Q6ZUI0 275 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 RIMKLAQ8IXN7 391 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 OSCP1Q8WVF1 389 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 GTF2H4Q92759 462 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ZNF689Q96CS4 500 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 VWCEQ96DN2 955 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 NTMT1Q9BV86 223 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 SUV39H2Q9H5I1 410 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ACTR8Q9H981 624 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 LIN28AQ9H9Z2 209 aaKnown RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 KCTD5Q9NXV2 234 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ZDHHC3Q9NYG2 299 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 PLXNA4Q9HCM2 1894 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 MKI67P46013 3256 aaKnown RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 GRXCR2A6NFK2 248 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 LEFTY2O00292 366 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 CLDN9O95484 217 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 CDH1P12830 882 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 NEK2P51955 445 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 TUBA4AP68366 448 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 B4GALNT1Q00973 533 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 MAD2L1Q13257 205 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 SUSD1Q6UWL2 747 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 PRR23BQ6ZRT6 265 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ANKRD33Q7Z3H0 272 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 OR2T12Q8NG77 320 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 FBXO30Q8TB52 745 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 BPIFB1Q8TDL5 484 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 IKZF5Q9H5V7 419 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 RSL24D1Q9UHA3 163 aaKnown RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 SLCO3A1Q9UIG8 710 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 MBD1Q9UIS9 605 aaPredicted RBP10.97□□□□□ -0.65
CHMP3-209ENST00000494623 ZNF510Q9Y2H8 683 aa10.97□□□□□ -0.65
CHMP3-209ENST00000494623 CROCCQ5TZA2 2017 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 TRAV19A0A0A6YYK7 116 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 UGT2B4P06133 528 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 PGRP06401 933 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 LAG3P18627 525 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 GGT1P19440 569 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 LHCGRP22888 699 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 HLA-FP30511 346 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 CAPGP40121 348 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 SLC7A9P82251 487 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 CHRNB3Q05901 458 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 FXNQ16595 210 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 CYBRD1Q53TN4 286 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 MPP7Q5T2T1 576 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 USP45Q70EL2 814 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 UBE2R2Q712K3 238 aaPredicted RBP10.96□□□□□ -0.65
CHMP3-209ENST00000494623 LPCAT2Q7L5N7 544 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 TRIM46Q7Z4K8 759 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 CPXM2Q8N436 756 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 OR8J3Q8NGG0 315 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 PYCR2Q96C36 320 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 OR52E6Q96RD3 313 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 CORO1BQ9BR76 489 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 BEGAINQ9BUH8 593 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 SLC46A2Q9BY10 475 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 NTN4Q9HB63 628 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 RDH14Q9HBH5 336 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 LIMD1Q9UGP4 676 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 TRPS1Q9UHF7 1281 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 PDE10AQ9Y233 779 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 ATP11BQ9Y2G3 1177 aa10.96□□□□□ -0.65
CHMP3-209ENST00000494623 MAGED1Q9Y5V3 778 aaPredicted RBP10.96□□□□□ -0.65
CHMP3-209ENST00000494623 A0A087WXM4 84 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 MTX2O75431 263 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 BMP10O95393 424 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 PDYNP01213 254 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 ASLP04424 464 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 CYP4F3Q08477 520 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 GTDC1Q4AE62 458 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 FAM98BQ52LJ0 330 aaKnown RBP10.96□□□□□ -0.66
CHMP3-209ENST00000494623 DPY19L3Q6ZPD9 716 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 PHACTR4Q8IZ21 702 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 FAM86B1Q8N7N1 296 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 SELENOMQ8WWX9 145 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 MYLIPQ8WY64 445 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 TMBIM1Q969X1 311 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 VOPP1Q96AW1 172 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 SLC32A1Q9H598 525 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 TMEM39AQ9NV64 488 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 C1orf109Q9NX04 203 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 ADGRE2Q9UHX3 823 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 NEUROG3Q9Y4Z2 214 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 MICAL3Q7RTP6 2002 aa10.96□□□□□ -0.66
CHMP3-209ENST00000494623 KRT87PA6NCN2 255 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms