RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 RPS18P62269 152 aaKnown RBP13□□□□□ -0.33
CTDSP1-212ENST00000494067 PLOD1Q02809 727 aaPredicted RBP13□□□□□ -0.33
CTDSP1-212ENST00000494067 CDH17Q12864 832 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 SEMA3AQ14563 771 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 ITIH4Q14624 930 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 LCN10Q6JVE6 187 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 TCTN3Q6NUS6 607 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 PPP1R21Q6ZMI0 780 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 RNF10Q8N5U6 811 aaKnown RBP13□□□□□ -0.33
CTDSP1-212ENST00000494067 ZNF501Q96CX3 271 aaPredicted RBP13□□□□□ -0.33
CTDSP1-212ENST00000494067 LRFN5Q96NI6 719 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 TSSK1BQ9BXA7 367 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 FRMD8P1Q9BZ68 369 aaPredicted RBP13□□□□□ -0.33
CTDSP1-212ENST00000494067 TSGA10Q9BZW7 698 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 XKR8Q9H6D3 395 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 ETNK1Q9HBU6 452 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 POMT2Q9UKY4 750 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 GUCA1BQ9UMX6 200 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 G3BP2Q9UN86 482 aaKnown RBP13□□□□□ -0.33
CTDSP1-212ENST00000494067 TP53TG5Q9Y2B4 290 aa13□□□□□ -0.33
CTDSP1-212ENST00000494067 HEATR9A2RTY3 570 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 SLC9B1P1A6NJY1 282 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 BTN3A1O00481 513 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 OR1I1O60431 355 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 HBQ1P09105 142 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 OR56A5P0C7T3 313 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 PVRP15151 417 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 AGXTP21549 392 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 PRDX3P30048 256 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 FDFT1P37268 417 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ABRQ12979 859 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 SNX1Q13596 522 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 UGT8Q16880 541 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 SYTL3Q4VX76 610 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ZNF789Q5FWF6 425 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 FAM69BQ5VUD6 431 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ASB18Q6ZVZ8 466 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ZNF534Q76KX8 674 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 SLC13A5Q86YT5 568 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 APLFQ8IW19 511 aaPredicted RBP12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 OR52E1Q8NGJ3 308 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 LKAAEAR1Q8TD35 194 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ELMO1Q92556 727 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 TLR10Q9BXR5 811 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 EPN3Q9H201 632 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ACSS2Q9NR19 701 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 POLG2Q9UHN1 485 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ANAPC5Q9UJX4 755 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ASF1AQ9Y294 204 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 MYO18BQ8IUG5 2567 aa12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 ASH1LQ9NR48 2969 aaKnown RBP12.99□□□□□ -0.33
CTDSP1-212ENST00000494067 UBR5O95071 2799 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 SNRNP200O75643 2136 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 FER1L5A0AVI2 2057 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 TNRC6AQ8NDV7 1962 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 TMEM150CB9EJG8 249 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 E7EQ34 232 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 MEN1O00255 615 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 HCRTR1O43613 425 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 KRT86O43790 486 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 SUN1O94901 812 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 IFNB1P01574 187 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 ST6GAL1P15907 406 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 SHMT2P34897 504 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 GPS2Q13227 327 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 PRKG2Q13237 762 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 SEMA5AQ13591 1074 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 BOP1Q14137 746 aaKnown RBP12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 BRD3Q15059 726 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 MEI1Q5TIA1 1274 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 IZUMO3Q5VZ72 239 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 TBC1D21Q8IYX1 336 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 GPR135Q8IZ08 494 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 ADGRF3Q8IZF5 1079 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 CCDC89Q8N998 374 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 LMNTD1Q8N9Z9 388 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 C17orf62Q9BQA9 187 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 HGH1Q9BTY7 390 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 KLHL25Q9H0H3 589 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 ACTR5Q9H9F9 607 aaPredicted RBP12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 ACTR10Q9NZ32 417 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 TLK1Q9UKI8 766 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 SNX7Q9UNH6 387 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 ICKQ9UPZ9 632 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 ZNF148Q9UQR1 794 aa12.98□□□□□ -0.33
CTDSP1-212ENST00000494067 CYSRT1A8MQ03 144 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 C9J4A7 227 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 BHMG1C9JSJ3 638 aaPredicted RBP12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 GOT2P00505 430 aaKnown RBP12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 CTSBP07858 339 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 RAB40ALP0C0E4 278 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 MSL3P1P0C860 447 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 ADRA1DP25100 572 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 ACADLP28330 430 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 ITGA1P56199 1179 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 PRAMEP78395 509 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 ACVR1Q04771 509 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 IL10RAQ13651 578 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 AFTPHQ6ULP2 937 aa12.97□□□□□ -0.33
CTDSP1-212ENST00000494067 PACS1Q6VY07 963 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms