RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, human

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN7-216	ENST00000492977	HACD2	Q6Y1H2	254 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	MBOAT1	Q6ZNC8	495 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977		Q6ZSR9	355 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	MYLK4	Q86YV6	388 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	FUNDC1	Q8IVP5	155 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	CHPF	Q8IZ52	775 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	ZNF513	Q8N8E2	541 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	DCBLD1	Q8N8Z6	715 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	ZNF454	Q8N9F8	522 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	ZNF514	Q96K75	400 aa	Predicted RBP	13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	CDRT15	Q96T59	188 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	NPAS2	Q99743	824 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	SLC29A3	Q9BZD2	475 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	BRINP2	Q9C0B6	783 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	TRIM39	Q9HCM9	518 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	AIG1	Q9NVV5	245 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	GIMAP2	Q9UG22	337 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	NDUFAF1	Q9Y375	327 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	GPR45	Q9Y5Y3	372 aa		13.73	□□□□□ -0.21
PTPN7-216	ENST00000492977	FBP2	O00757	339 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	FKBP6	O75344	327 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	PSIP1	O75475	530 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	KRT36	O76013	467 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	PDE5A	O76074	875 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	GNAZ	P19086	355 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	MAP4	P27816	1152 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	SLC6A12	P48065	614 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	RCN1	Q15293	331 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	CST6	Q15828	149 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	SMU1	Q2TAY7	513 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	C6orf136	Q5SQH8	315 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	REP15	Q6BDI9	236 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	AAGAB	Q6PD74	315 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	SCIMP	Q6UWF3	145 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	ADGRG6	Q86SQ4	1221 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	HPS6	Q86YV9	775 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	PCYOX1L	Q8NBM8	494 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	OR2T11	Q8NH01	316 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	CSGALNACT1	Q8TDX6	532 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	JADE3	Q92613	823 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	FBXL8	Q96CD0	374 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	NECTIN4	Q96NY8	510 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	P2RY13	Q9BPV8	354 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	ZNF576	Q9H609	170 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	ZDHHC4	Q9NPG8	344 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	MRPL40	Q9NQ50	206 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	CLDND1	Q9NY35	253 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	STX18	Q9P2W9	335 aa	Known RBP	13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	POMP	Q9Y244	141 aa		13.72	□□□□□ -0.21
PTPN7-216	ENST00000492977	ANTXRL	A6NF34	631 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	TMEM202	A6NGA9	273 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	LOC730098	B7Z3J9	87 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	ANHX	E9PGG2	379 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977		H0Y3Z8	333 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	SLC28A1	O00337	649 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	LIN7A	O14910	233 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	VEGFD	O43915	354 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	SYNCRIP	O60506	623 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	CLDN9	O95484	217 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	CAT	P04040	527 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	C5AR1	P21730	350 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	DRD3	P35462	400 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	GCK	P35557	465 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	KIR2DL1	P43626	348 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	PLOD1	Q02809	727 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	EMX2	Q04743	252 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	GTF2H3	Q13889	308 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	CCDC6	Q16204	474 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	ZNF658B	Q4V348	819 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	PDCD4	Q53EL6	469 aa	Known RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	PIGG	Q5H8A4	983 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	TCHHL1	Q5QJ38	904 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	SLC22A15	Q8IZD6	547 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	SFRP1	Q8N474	314 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	OR9I1	Q8NGQ6	314 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	ATL1	Q8WXF7	558 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	ZDHHC16	Q969W1	377 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	ROPN1L	Q96C74	230 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	MSLNL	Q96KJ4	702 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	LINC00615	Q96LM1	132 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	MAGEB10	Q96LZ2	347 aa	Predicted RBP	13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	PPP3R2	Q96LZ3	170 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	FOPNL	Q96NB1	174 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	OR2AG1	Q9H205	316 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	EBF2	Q9HAK2	575 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	STOML1	Q9UBI4	398 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	GPR34	Q9UPC5	381 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	CKAP5	Q14008	2032 aa		13.71	□□□□□ -0.21
PTPN7-216	ENST00000492977	C17orf113	A0A1B0GUU1	675 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977		K7EQS6	105 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977		K7ESM1	405 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	MRAS	O14807	208 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	LSM1	O15116	133 aa	Known RBP	13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	MID1	O15344	667 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	CFLAR	O15519	480 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	RGS14	O43566	566 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	LILRB5	O75023	590 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	ULK1	O75385	1050 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	ANP32D	O95626	131 aa		13.71	□□□□□ -0.22
PTPN7-216	ENST00000492977	LTBR	P36941	435 aa		13.71	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms