RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 C1orf54Q8WWF1 131 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 GPR87Q9BY21 358 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 CHST8Q9H2A9 424 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 SLC2A6Q9UGQ3 507 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 TLK1Q9UKI8 766 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 ZNF148Q9UQR1 794 aa16.74■□□□□ 0.27
SGMS1-204ENST00000492601 NAV2Q8IVL1 2488 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 ERI2A8K979 691 aaKnown RBP16.73■□□□□ 0.27
SGMS1-204ENST00000492601 E7EVH7 732 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 DNAJB5O75953 348 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 GAS8O95995 478 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 GSTM1P09488 218 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 STIP1P31948 543 aaKnown RBP16.73■□□□□ 0.27
SGMS1-204ENST00000492601 PMS2P54278 862 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 GSTM4Q03013 218 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 IL10RAQ13651 578 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 ITIH4Q14624 930 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 IGFBP7Q16270 282 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 LCN10Q6JVE6 187 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 SLC13A5Q86YT5 568 aaPredicted RBP16.73■□□□□ 0.27
SGMS1-204ENST00000492601 ADGRF3Q8IZF5 1079 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 OR13J1Q8NGT2 312 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 CPT1BQ92523 772 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 HDAC10Q969S8 669 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 CLIP3Q96DZ5 547 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 TRAPPC9Q96Q05 1148 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 TRIM55Q9BYV6 548 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 PITPNM3Q9BZ71 974 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 LATS2Q9NRM7 1088 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 ICKQ9UPZ9 632 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 FARSAQ9Y285 508 aaKnown RBP16.73■□□□□ 0.27
SGMS1-204ENST00000492601 PCM1Q15154 2024 aa16.73■□□□□ 0.27
SGMS1-204ENST00000492601 HEATR9A2RTY3 570 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 C2orf74A8MZ97 194 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 LIN7AO14910 233 aaPredicted RBP16.72■□□□□ 0.27
SGMS1-204ENST00000492601 OR1I1O60431 355 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 RECKO95980 971 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 FTH1P02794 183 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 KLK3P07288 261 aaPredicted RBP16.72■□□□□ 0.27
SGMS1-204ENST00000492601 PSMA3P25788 255 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 FDFT1P37268 417 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 CSE1LP55060 971 aaKnown RBP16.72■□□□□ 0.27
SGMS1-204ENST00000492601 GSDMDP57764 484 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 LAMB3Q13751 1172 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 UGT8Q16880 541 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 SYTL3Q4VX76 610 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 PLEKHS1Q5SXH7 462 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 SYVN1Q86TM6 617 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 TRIM73Q86UV7 250 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 DSELQ8IZU8 1212 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.72■□□□□ 0.27
SGMS1-204ENST00000492601 RAB6BQ9NRW1 208 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 ACTR10Q9NZ32 417 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 ASF1AQ9Y294 204 aa16.72■□□□□ 0.27
SGMS1-204ENST00000492601 TDRKHQ9Y2W6 561 aaKnown RBP16.72■□□□□ 0.27
SGMS1-204ENST00000492601 MEN1O00255 615 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 QSOX1O00391 747 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 ARHGAP6O43182 974 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 MAP3K7O43318 606 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 SUN1O94901 812 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 GOT2P00505 430 aaKnown RBP16.71■□□□□ 0.27
SGMS1-204ENST00000492601 OR56A5P0C7T3 313 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 CYP2A7P20853 494 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 KLRB1Q12918 225 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 CHAF1BQ13112 559 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 SEMA5AQ13591 1074 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 ZNF789Q5FWF6 425 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 TSTD2Q5T7W7 516 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 FAM69BQ5VUD6 431 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 CPZQ66K79 652 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 TCTN3Q6NUS6 607 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 SPESP1Q6UW49 350 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 PACS1Q6VY07 963 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 ZNF517Q6ZMY9 492 aaPredicted RBP16.71■□□□□ 0.27
SGMS1-204ENST00000492601 UNC5AQ6ZN44 842 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 ASB18Q6ZVZ8 466 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 HOOK3Q86VS8 718 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 ENDOVQ8N8Q3 282 aaKnown RBP16.71■□□□□ 0.27
SGMS1-204ENST00000492601 GLIS1Q8NBF1 620 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 OR6P1Q8NGX9 317 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 SEC14L1Q92503 715 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 ZNF778Q96MU6 729 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 FRMD8P1Q9BZ68 369 aaPredicted RBP16.71■□□□□ 0.27
SGMS1-204ENST00000492601 TSGA10Q9BZW7 698 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 ACTR5Q9H9F9 607 aaPredicted RBP16.71■□□□□ 0.27
SGMS1-204ENST00000492601 PLAGL1Q9UM63 463 aa16.71■□□□□ 0.27
SGMS1-204ENST00000492601 MAST4O15021 2626 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 SLC5A10A0PJK1 596 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 ARGFXA6NJG6 315 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 GOLGA6L6A8MZA4 724 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 BHMG1C9JSJ3 638 aaPredicted RBP16.7■□□□□ 0.26
SGMS1-204ENST00000492601 KRT86O43790 486 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 PDGFAP04085 211 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 TPBGLP0DKB5 382 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 UGT2B7P16662 529 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 ADRA1DP25100 572 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 ACADLP28330 430 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 RORAP35398 523 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 PTCHD3Q3KNS1 767 aa16.7■□□□□ 0.26
SGMS1-204ENST00000492601 IZUMO3Q5VZ72 239 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms