RNA–Protein interactions for RNA: ENST00000491860.1

NUP50-217, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-217ENST00000491860 TCTN2Q96GX1 697 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 NLNQ9BYT8 704 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 LACRTQ9GZZ8 138 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 OR52A5Q9H2C5 316 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 C10orf88Q9H8K7 445 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 ZNF71Q9NQZ8 489 aaPredicted RBP8.5□□□□□ -1.05
NUP50-217ENST00000491860 ACSS2Q9NR19 701 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 OR6C2Q9NZP2 312 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 FAM8A1Q9UBU6 413 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 TFR2Q9UP52 801 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 TP53TG5Q9Y2B4 290 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 DUSP10Q9Y6W6 482 aa8.5□□□□□ -1.05
NUP50-217ENST00000491860 NBASA2RRP1 2371 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 USP9XQ93008 2570 aaPredicted RBP8.49□□□□□ -1.05
NUP50-217ENST00000491860 MROH6A6NGR9 719 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 SLC9B1P1A6NJY1 282 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 TMEM150CB9EJG8 249 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 E7EVH7 732 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 TIAF1O95411 115 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 MSNP26038 577 aaKnown RBP8.49□□□□□ -1.05
NUP50-217ENST00000491860 CDC25BP30305 580 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 CA5AP35218 305 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 PGDP52209 483 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 POU6F1Q14863 301 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 GPR19Q15760 415 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 ATP1A1-AS1Q5TC04 95 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 AFTPHQ6ULP2 937 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 SPESP1Q6UW49 350 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 PPP1R21Q6ZMI0 780 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 MED25Q71SY5 747 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 RAB43Q86YS6 212 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 FAM26EQ8N5C1 309 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 EFCAB3Q8N7B9 438 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 TMEM102Q8N9M5 508 aaPredicted RBP8.49□□□□□ -1.05
NUP50-217ENST00000491860 ACRBPQ8NEB7 543 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 OR5K2Q8NHB8 316 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 PROKR1Q8TCW9 393 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 MAIP1Q8WWC4 291 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 ELMO1Q92556 727 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 SLC22A18Q96BI1 424 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 SGSM3Q96HU1 749 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 HES6Q96HZ4 224 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 TRAPPC9Q96Q05 1148 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 RANBP9Q96S59 729 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 TMEM121Q9BTD3 319 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 TLR10Q9BXR5 811 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 FAM96AQ9H5X1 160 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 ACTR5Q9H9F9 607 aaPredicted RBP8.49□□□□□ -1.05
NUP50-217ENST00000491860 SMARCAL1Q9NZC9 954 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 ANAPC5Q9UJX4 755 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 TLK1Q9UKI8 766 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 SNX7Q9UNH6 387 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 SRPK3Q9UPE1 567 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 REXO2Q9Y3B8 237 aaKnown RBP8.49□□□□□ -1.05
NUP50-217ENST00000491860 ZNF451Q9Y4E5 1061 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 RP1L1Q8IWN7 2480 aaPredicted RBP8.49□□□□□ -1.05
NUP50-217ENST00000491860 MYO9AB2RTY4 2548 aa8.49□□□□□ -1.05
NUP50-217ENST00000491860 CCDC78A2IDD5 438 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 BTN3A1O00481 513 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 KPNA5O15131 536 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 PFDN6O15212 129 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 KRT86O43790 486 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 SUN1O94901 812 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 FKBP9O95302 570 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 METTL18O95568 372 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 ADRA1DP25100 572 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 RORAP35398 523 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 CD97P48960 835 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 PRAMEP78395 509 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 GPS2Q13227 327 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 OLIG2Q13516 323 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 SPARCL1Q14515 664 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 DBN1Q16643 649 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 ZNF658BQ4V348 819 aaPredicted RBP8.48□□□□□ -1.05
NUP50-217ENST00000491860 DNAJC21Q5F1R6 531 aaKnown RBP8.48□□□□□ -1.05
NUP50-217ENST00000491860 ARMC3Q5W041 872 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 PAPD7Q5XG87 772 aaKnown RBP8.48□□□□□ -1.05
NUP50-217ENST00000491860 SYTL1Q8IYJ3 562 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 RAB42Q8N4Z0 105 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 CCDC89Q8N998 374 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 PPHLN1Q8NEY8 458 aaKnown RBP8.48□□□□□ -1.05
NUP50-217ENST00000491860 ASZ1Q8WWH4 475 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 NACC2Q96BF6 587 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 FAM118BQ9BPY3 351 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 HGH1Q9BTY7 390 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 SLC25A23Q9BV35 468 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 RAB11FIP5Q9BXF6 653 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 ING2Q9H160 280 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 CHST8Q9H2A9 424 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 INTS7Q9NVH2 962 aaKnown RBP8.48□□□□□ -1.05
NUP50-217ENST00000491860 ACTR10Q9NZ32 417 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 GPN3Q9UHW5 284 aaPredicted RBP8.48□□□□□ -1.05
NUP50-217ENST00000491860 TCFL5Q9UL49 500 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 ASF1AQ9Y294 204 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 SPTBP11277 2137 aa8.48□□□□□ -1.05
NUP50-217ENST00000491860 UTP20O75691 2785 aaKnown RBP8.47□□□□□ -1.05
NUP50-217ENST00000491860 UNC79Q9P2D8 2635 aa8.47□□□□□ -1.05
NUP50-217ENST00000491860 A0A0J9YY10 115 aa8.47□□□□□ -1.05
NUP50-217ENST00000491860 BTN3A3O00478 584 aa8.47□□□□□ -1.05
NUP50-217ENST00000491860 DDX3YO15523 660 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms