RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 KPNA2P52292 529 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 PRKG2Q13237 762 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 DNAJC21Q5F1R6 531 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 OTUD6BQ8N6M0 293 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 PHC3Q8NDX5 983 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 OR52E1Q8NGJ3 308 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 SLC22A18Q96BI1 424 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 HGH1Q9BTY7 390 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 OR6C2Q9NZP2 312 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 TDRKHQ9Y2W6 561 aaKnown RBP16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 PCDHGA6Q9Y5G7 932 aa16.09■□□□□ 0.17
PDLIM2-217ENST00000491330 CDC14CA4D256 554 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 SGTAO43765 313 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 KIF5CO60282 957 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 NDUFS3O75489 264 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 GOT2P00505 430 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 ZNF28P17035 718 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 PAMP19021 973 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 PSMA3P25788 255 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 KCNAB1Q14722 419 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 BRD3Q15059 726 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 GPR19Q15760 415 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 PTRHD1Q6GMV3 140 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 SYVN1Q86TM6 617 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 LRRC6Q86X45 466 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 PIANPQ8IYJ0 282 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 MPP5Q8N3R9 675 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 DENND1AQ8TEH3 1009 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 NAT14Q8WUY8 206 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 TCTN2Q96GX1 697 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 SGSM3Q96HU1 749 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 PDLIM2Q96JY6 352 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 FOPNLQ96NB1 174 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 LRFN5Q96NI6 719 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 DPH2Q9BQC3 489 aaPredicted RBP16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 CASS4Q9NQ75 786 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 CATSPERZQ9NTU4 200 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 IRAK4Q9NWZ3 460 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 ANAPC2Q9UJX6 822 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 FARSAQ9Y285 508 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 MAN2B2Q9Y2E5 1009 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 TCAF1Q9Y4C2 921 aa16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 FASNP49327 2511 aaKnown RBP16.08■□□□□ 0.16
PDLIM2-217ENST00000491330 LAMA5O15230 3695 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 NBEAQ8NFP9 2946 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 CELSR3Q9NYQ7 3312 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 C9J4A7 227 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 E7EQ34 232 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 PTPN4P29074 926 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 PDHA2P29803 388 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 FOXN2P32314 431 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 ARCN1P48444 511 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 SESN2P58004 480 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 PPP1CAP62136 330 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 SIX1Q15475 284 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 MRNIPQ6NTE8 343 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 RASGEF1CQ8N431 466 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 LILRA3Q8N6C8 439 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 OR5K2Q8NHB8 316 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 SKA2Q8WVK7 121 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 ZNF501Q96CX3 271 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 CARD6Q9BX69 1037 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 ACTR5Q9H9F9 607 aaPredicted RBP16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 INTS7Q9NVH2 962 aaKnown RBP16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 ACTR10Q9NZ32 417 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 GNPTGQ9UJJ9 305 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 VPS9D1Q9Y2B5 631 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 PADI2Q9Y2J8 665 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 AP1M2Q9Y6Q5 423 aa16.07■□□□□ 0.16
PDLIM2-217ENST00000491330 BPTFQ12830 3046 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 ISM1B1AKI9 464 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 TMEM150CB9EJG8 249 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 BTN3A1O00481 513 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 PRMT5O14744 637 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 RFPL1O75677 317 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 MSL3P1P0C860 447 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 OAS2P29728 719 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 RPL22P35268 128 aaKnown RBP16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 ITGA1P56199 1179 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 HSPA14Q0VDF9 509 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 KIR2DS3Q14952 304 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 LACTB2Q53H82 288 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 RNF187Q5TA31 235 aaPredicted RBP16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 MAGEC3Q8TD91 643 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 CT55Q8WUE5 264 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 ACTL8Q9H568 366 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 CLMPQ9H6B4 373 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 SAMD15Q9P1V8 674 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 SLC39A10Q9ULF5 831 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 SNX7Q9UNH6 387 aa16.06■□□□□ 0.16
PDLIM2-217ENST00000491330 OR51F1A6NGY5 319 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 H3BMM5 538 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 MEN1O00255 615 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 BTN3A3O00478 584 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 CD3EAPO15446 510 aaKnown RBP16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 SUV39H1O43463 412 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 WISP1O95388 367 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 ITGB6P18564 788 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 CSRP3P50461 194 aa16.05■□□□□ 0.16
PDLIM2-217ENST00000491330 ACVR1Q04771 509 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms