RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 USP53Q70EK8 1073 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 RAB11FIP2Q7L804 512 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 TMPRSS9Q7Z410 1059 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 ARHGAP22Q7Z5H3 698 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 B3GNT8Q7Z7M8 397 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 CCDC25Q86WR0 208 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 KMT5CQ86Y97 462 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 IFT20Q8IY31 132 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 AGBL5Q8NDL9 886 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 FAM45AQ8TCE6 357 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 MAGEC3Q8TD91 643 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 LCN9Q8WX39 176 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 NCSTNQ92542 709 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 INPP5DQ92835 1189 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 C9orf72Q96LT7 481 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 CCDC74BQ96LY2 380 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 RAB11FIP5Q9BXF6 653 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 TWSG1Q9GZX9 223 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 SEMA6CQ9H3T2 930 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 SRMSQ9H3Y6 488 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 OR6C2Q9NZP2 312 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 SEMA5BQ9P283 1151 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 MED16Q9Y2X0 877 aa10.78□□□□□ -0.68
CPSF7-212ENST00000489728 TCRBV9S1A1TA0A576 114 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 FAM159BA6NKW6 160 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 ITGA2BP08514 1039 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 MPC1LP0DKB6 136 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 HOXB3P14651 431 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 GABRB3P28472 473 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 CSTF2P33240 577 aaKnown RBP eCLIP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 PHBP35232 272 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 PPM1FP49593 454 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 RGS4P49798 205 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 CSE1LP55060 971 aaKnown RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 GABREP78334 506 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 PRKAA1Q13131 559 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 DNTTIP2Q5QJE6 756 aaKnown RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 ARMC6Q6NXE6 501 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 AMIGO1Q86WK6 493 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 VRK3Q8IV63 474 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 RAB42Q8N4Z0 105 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 FBXO15Q8NCQ5 510 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 OR52E1Q8NGJ3 308 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 OR5AR1Q8NGP9 310 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 CD200R1Q8TD46 325 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 UBXN4Q92575 508 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 RSC1A1Q92681 617 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 ZNF578Q96N58 590 aaPredicted RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 CPNE1Q99829 537 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 MCMBPQ9BTE3 642 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 HGH1Q9BTY7 390 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 RHOJQ9H4E5 214 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 ZNF768Q9H5H4 540 aaKnown RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 CCDC86Q9H6F5 360 aaKnown RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 POPDC3Q9HBV1 291 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 LRRC4CQ9HCJ2 640 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 TXNDC16Q9P2K2 825 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 TRMT6Q9UJA5 497 aaKnown RBP10.77□□□□□ -0.69
CPSF7-212ENST00000489728 SATB2Q9UPW6 733 aa10.77□□□□□ -0.69
CPSF7-212ENST00000489728 PRAMEF33A0A0G2JMD5 474 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 TLCD2A6NGC4 264 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 B4E171 279 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 CASC3O15234 703 aaKnown RBP10.76□□□□□ -0.69
CPSF7-212ENST00000489728 CAPN5O15484 640 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-212ENST00000489728 PSIP1O75475 530 aaKnown RBP10.76□□□□□ -0.69
CPSF7-212ENST00000489728 FKBP9O95302 570 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 JMJD7P0C870 316 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 TYRP1P17643 537 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 ECHS1P30084 290 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 SSTR1P30872 391 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 GP5P40197 560 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 TSPAN7P41732 249 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 RAB28P51157 221 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 RAB15P59190 212 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 GPX6P59796 221 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 SP140Q13342 867 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 SLMAPQ14BN4 828 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 KYNUQ16719 465 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 C3orf38Q5JPI3 329 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 NAPRTQ6XQN6 538 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 STRA8Q7Z7C7 330 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 CLEC14AQ86T13 490 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 ZC3HC1Q86WB0 502 aaKnown RBP10.76□□□□□ -0.69
CPSF7-212ENST00000489728 CNPY4Q8N129 248 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 FBXO39Q8N4B4 442 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 KDF1Q8NAX2 398 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-212ENST00000489728 GIMAP7Q8NHV1 300 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 HMGCLL1Q8TB92 370 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 SKA2Q8WVK7 121 aaPredicted RBP10.76□□□□□ -0.69
CPSF7-212ENST00000489728 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.76□□□□□ -0.69
CPSF7-212ENST00000489728 RAD51AP1Q96B01 352 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 SLC22A18Q96BI1 424 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 GPR21Q99679 349 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 FUT8Q9BYC5 575 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 THSD1Q9NS62 852 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 HRASLS2Q9NWW9 162 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 SPATA7Q9P0W8 599 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 ACSL6Q9UKU0 697 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 POMT2Q9UKY4 750 aa10.76□□□□□ -0.69
CPSF7-212ENST00000489728 ICKQ9UPZ9 632 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms