RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 AP1M1Q9BXS5 423 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 EIF2B3Q9NR50 452 aaKnown RBP13.6□□□□□ -0.23
VTI1A-206ENST00000489142 CATSPERZQ9NTU4 200 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 ACTR10Q9NZ32 417 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 ZKSCAN5Q9Y2L8 839 aa13.6□□□□□ -0.23
VTI1A-206ENST00000489142 HELZ2Q9BYK8 2649 aaKnown RBP13.6□□□□□ -0.23
VTI1A-206ENST00000489142 BSNQ9UPA5 3926 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 SLC5A10A0PJK1 596 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 GOLGA6L3A6NEY3 463 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 B8ZZF3 427 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 GOLGA8KD6RF30 607 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 GOLGA8TH3BQL2 631 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 TERTO14746 1132 aaKnown RBP13.59□□□□□ -0.23
VTI1A-206ENST00000489142 NRDCO43847 1150 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 AVILO75366 819 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 SCRG1O75711 98 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 CCNYL3P0C7X3 344 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 TPBGLP0DKB5 382 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 ACADLP28330 430 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 CCR7P32248 378 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 RPS18P62269 152 aaKnown RBP13.59□□□□□ -0.23
VTI1A-206ENST00000489142 HSPA14Q0VDF9 509 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 ABRQ12979 859 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 LYPLAL1Q5VWZ2 237 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 ANKRD22Q5VYY1 191 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 UNC5AQ6ZN44 842 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 NLRP9Q7RTR0 991 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 OTUD6BQ8N6M0 293 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 CFAP61Q8NHU2 1237 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 TRIM56Q9BRZ2 755 aaKnown RBP13.59□□□□□ -0.23
VTI1A-206ENST00000489142 EFHD1Q9BUP0 239 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 TFB2MQ9H5Q4 396 aaKnown RBP13.59□□□□□ -0.23
VTI1A-206ENST00000489142 GRPEL1Q9HAV7 217 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 LHX9Q9NQ69 397 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 SPHK1Q9NYA1 384 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 TSR3Q9UJK0 312 aaKnown RBP13.59□□□□□ -0.23
VTI1A-206ENST00000489142 RIMKLBQ9ULI2 386 aa13.59□□□□□ -0.23
VTI1A-206ENST00000489142 C2orf74A8MZ97 194 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 TMEM150CB9EJG8 249 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 QSOX1O00391 747 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 CD3EAPO15446 510 aaKnown RBP13.58□□□□□ -0.24
VTI1A-206ENST00000489142 SLC28A2O43868 658 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 F7P08709 466 aaPredicted RBP13.58□□□□□ -0.24
VTI1A-206ENST00000489142 GSTM1P09488 218 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 ATXN8OSP0DMR3 200 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 CCR10P46092 362 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 GSTM4Q03013 218 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 GPS1Q13098 491 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 GPS2Q13227 327 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 KCNAB2Q13303 367 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 DNASE1L3Q13609 305 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 TMTC4Q5T4D3 741 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 CYB5D1Q6P9G0 228 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 FAM20CQ8IXL6 584 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 MPP5Q8N3R9 675 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 C2orf73Q8N5S3 287 aaPredicted RBP13.58□□□□□ -0.24
VTI1A-206ENST00000489142 SLC38A9Q8NBW4 561 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 OR1L3Q8NH93 324 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 MFSD3Q96ES6 412 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 TRAPPC9Q96Q05 1148 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 TTC1Q99614 292 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 TRIM4Q9C037 500 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 FAM117AQ9C073 453 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 IL22Q9GZX6 179 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 C1GALT1Q9NS00 363 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 KCND1Q9NSA2 647 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 TREX1Q9NSU2 369 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 STARD5Q9NSY2 213 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 IL1RAPL1Q9NZN1 696 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 BFARQ9NZS9 450 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 ANAPC5Q9UJX4 755 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 PADI1Q9ULC6 663 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 BTRCQ9Y297 605 aa13.58□□□□□ -0.24
VTI1A-206ENST00000489142 TLN1Q9Y490 2541 aaKnown RBP13.57□□□□□ -0.24
VTI1A-206ENST00000489142 TENM4Q6N022 2769 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 PIPSLA2A3N6 862 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 CDC14CA4D256 554 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 KRT87PA6NCN2 255 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 MATN2O00339 956 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 CPNE3O75131 537 aaKnown RBP13.57□□□□□ -0.24
VTI1A-206ENST00000489142 VAPBO95292 243 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 KRT14P02533 472 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 CHRM5P08912 532 aaPredicted RBP13.57□□□□□ -0.24
VTI1A-206ENST00000489142 UGT2B7P16662 529 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 TPSB2P20231 275 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 ARNTP27540 789 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 NPY2RP49146 381 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 EIF3BP55884 814 aaKnown RBP13.57□□□□□ -0.24
VTI1A-206ENST00000489142 KCNJ11Q14654 390 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 TPSAB1Q15661 275 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 DEFB110Q30KQ9 67 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 FAM69BQ5VUD6 431 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 LCN10Q6JVE6 187 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 SPESP1Q6UW49 350 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 C4orf22Q6V702 233 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 TAX1BP1Q86VP1 789 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 PTRH1Q86Y79 214 aaKnown RBP13.57□□□□□ -0.24
VTI1A-206ENST00000489142 REXO1L1PQ8IX06 675 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 SLC35F6Q8N357 371 aa13.57□□□□□ -0.24
VTI1A-206ENST00000489142 OR5K2Q8NHB8 316 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms