RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 RPS15P62841 145 aaKnown RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 CYP4F2P78329 520 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 CRADDP78560 199 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SRSF6Q13247 344 aaKnown RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 COL9A2Q14055 689 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 LY6DQ14210 128 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 MAP7Q14244 749 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 KCNAB1Q14722 419 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SIX1Q15475 284 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 LRRC8BQ6P9F7 803 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 OTOAQ7RTW8 1153 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 ZNF605Q86T29 641 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 TBC1D21Q8IYX1 336 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 GPR135Q8IZ08 494 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SLC35F6Q8N357 371 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 PRELID2Q8N945 189 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 STARD8Q92502 1023 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 MR1Q95460 341 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 RNF31Q96EP0 1072 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 MS4A14Q96JA4 679 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SLC45A3Q96JT2 553 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 BBC3Q96PG8 261 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 FCRL4Q96PJ5 515 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 OSBPL9Q96SU4 736 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 TFB2MQ9H5Q4 396 aaKnown RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 XKR8Q9H6D3 395 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SYTL2Q9HCH5 934 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 C1GALT1Q9NS00 363 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 ASIC3Q9UHC3 531 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 POMT2Q9UKY4 750 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 SLC39A10Q9ULF5 831 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 TMEM184BQ9Y519 407 aaPredicted RBP8.87□□□□□ -0.99
HDAC6-232ENST00000489053 MAD1L1Q9Y6D9 718 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 PRSS21Q9Y6M0 314 aa8.87□□□□□ -0.99
HDAC6-232ENST00000489053 MAGEB16A2A368 324 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 SLC9B1P1A6NJY1 282 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 SDR42E2A6NKP2 422 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 TMEM150CB9EJG8 249 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 GOLGA8MH3BSY2 632 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 PHF2O75151 1096 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 VAPBO95292 243 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 FOLR1P15328 257 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 TCP1P17987 556 aaKnown RBP8.86□□□□□ -0.99
HDAC6-232ENST00000489053 COILP38432 576 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-232ENST00000489053 FNTAP49354 379 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 KPNA2P52292 529 aaKnown RBP8.86□□□□□ -0.99
HDAC6-232ENST00000489053 GNG11P61952 73 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 ACVR1Q04771 509 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 ABRQ12979 859 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 GPR19Q15760 415 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 TBR1Q16650 682 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 ARMC3Q5W041 872 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 NAPRTQ6XQN6 538 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 LDB1Q86U70 411 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-232ENST00000489053 OR5AR1Q8NGP9 310 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 OR5K2Q8NHB8 316 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 MAGEC3Q8TD91 643 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 SEC14L1Q92503 715 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 CPT1BQ92523 772 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 CLIP3Q96DZ5 547 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 SLC41A2Q96JW4 573 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 ZNF778Q96MU6 729 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 CARD6Q9BX69 1037 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 MRM3Q9HC36 420 aaKnown RBP8.86□□□□□ -0.99
HDAC6-232ENST00000489053 KCND1Q9NSA2 647 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 INTS7Q9NVH2 962 aaKnown RBP8.86□□□□□ -0.99
HDAC6-232ENST00000489053 SYBUQ9NX95 663 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 ACTR10Q9NZ32 417 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 OR6C2Q9NZP2 312 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.86□□□□□ -0.99
HDAC6-232ENST00000489053 SERTAD3Q9UJW9 196 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 CROTQ9UKG9 612 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 SSUH2Q9Y2M2 353 aa8.86□□□□□ -0.99
HDAC6-232ENST00000489053 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.85□□□□□ -0.99
HDAC6-232ENST00000489053 LOC101059948A0A1B0GTJ6 334 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 ISM1B1AKI9 464 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 C9J4A7 227 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 E7EQ34 232 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 BTN3A1O00481 513 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 DLGAP3O95886 979 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 NTRK1P04629 796 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 HBQ1P09105 142 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 FAM87AP0C7U9 286 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 MLNP12872 115 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 CHRM3P20309 590 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 PSMA3P25788 255 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 NMBRP28336 390 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 PRDX3P30048 256 aaKnown RBP8.85□□□□□ -0.99
HDAC6-232ENST00000489053 CCNFP41002 786 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 PAFAH1B1P43034 410 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 CDC20Q12834 499 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 DHX34Q14147 1143 aaKnown RBP8.85□□□□□ -0.99
HDAC6-232ENST00000489053 DEFB109BQ30KR1 87 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 TTLL9Q3SXZ7 439 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 PWWP2BQ6NUJ5 590 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 SPESP1Q6UW49 350 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 CES3Q6UWW8 571 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 UNC5DQ6UXZ4 953 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 ZNF534Q76KX8 674 aa8.85□□□□□ -0.99
HDAC6-232ENST00000489053 PRICKLE2Q7Z3G6 844 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms