RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 C4orf50Q6ZRC1 276 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 LINC00346Q8IVM7 164 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 C17orf53Q8N3J3 647 aaPredicted RBP3.25□□□□□ -1.89
RFC4-213ENST00000489028 TRIML1Q8N9V2 468 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 C1orf131Q8NDD1 294 aaKnown RBP3.25□□□□□ -1.89
RFC4-213ENST00000489028 OR5M8Q8NGP6 311 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 OR13J1Q8NGT2 312 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 HCAR2Q8TDS4 363 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 GIMAP5Q96F15 307 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 GMPPAQ96IJ6 420 aaPredicted RBP3.25□□□□□ -1.89
RFC4-213ENST00000489028 CDRT15Q96T59 188 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 MAK16Q9BXY0 300 aaKnown RBP3.25□□□□□ -1.89
RFC4-213ENST00000489028 LAT2Q9GZY6 243 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 ZNF701Q9NV72 531 aaPredicted RBP3.25□□□□□ -1.89
RFC4-213ENST00000489028 ATAD3AQ9NVI7 634 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 HAUS2Q9NVX0 235 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 TAB2Q9NYJ8 693 aa3.25□□□□□ -1.89
RFC4-213ENST00000489028 ADD3Q9UEY8 706 aaKnown RBP3.25□□□□□ -1.89
RFC4-213ENST00000489028 ZNF541Q9H0D2 1346 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 IGHV4-4A0A075B6R2 117 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 HYKKA2RU49 373 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 TCERG1O14776 1098 aaKnown RBP3.24□□□□□ -1.89
RFC4-213ENST00000489028 ENTPD3O75355 529 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 AP2A2O94973 939 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 PIGNO95427 931 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 RAF1P04049 648 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 HMBSP08397 361 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 EFNA1P20827 205 aaPredicted RBP3.24□□□□□ -1.89
RFC4-213ENST00000489028 CASP2P42575 452 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 TAF6P49848 677 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 TPD52P55327 224 aaPredicted RBP3.24□□□□□ -1.89
RFC4-213ENST00000489028 PPARDQ03181 441 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 MEA1Q16626 185 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 KRT79Q5XKE5 535 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 TMCO3Q6UWJ1 677 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 CLEC4GQ6UXB4 293 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 PIGZQ86VD9 579 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 FBXO39Q8N4B4 442 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 POC5Q8NA72 575 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 OR4C3Q8NH37 302 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 HPSE2Q8WWQ2 592 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 CCDC34Q96HJ3 373 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 FNBP1Q96RU3 617 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 OPRPNQ99935 248 aaPredicted RBP3.24□□□□□ -1.89
RFC4-213ENST00000489028 TBC1D17Q9HA65 648 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 SDR39U1Q9NRG7 319 aaPredicted RBP3.24□□□□□ -1.89
RFC4-213ENST00000489028 TBC1D22BQ9NU19 505 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 PLCXD1Q9NUJ7 323 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 BARHL2Q9NY43 387 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 VPS28Q9UK41 221 aa3.24□□□□□ -1.89
RFC4-213ENST00000489028 WBP11Q9Y2W2 641 aaKnown RBP3.24□□□□□ -1.89
RFC4-213ENST00000489028 LAS1LQ9Y4W2 734 aaKnown RBP3.24□□□□□ -1.89
RFC4-213ENST00000489028 A0A087WW49 117 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 LOC102723996A0A087X1L8 192 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 MED24O75448 989 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 CRLF1O75462 422 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 CDC123O75794 336 aaPredicted RBP3.23□□□□□ -1.89
RFC4-213ENST00000489028 TOMM70O94826 608 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 WDPCPO95876 746 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 BCL10O95999 233 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 EDN1P05305 212 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 GPIP06744 558 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 CSH1P0DML2 217 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 CSH2P0DML3 217 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 VPREB1P12018 145 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 ARSEP51690 589 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 BMXP51813 675 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 KCNJ10P78508 379 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 CDK3Q00526 305 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 GRAPQ13588 217 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 LPAL2Q16609 132 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 PHLDA2Q53GA4 152 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 KLHL26Q53HC5 615 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 IGSF11Q5DX21 431 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 ZNF772Q68DY9 489 aaPredicted RBP3.23□□□□□ -1.89
RFC4-213ENST00000489028 Q6ZSR9 355 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 TMPRSS11FQ6ZWK6 438 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 PCGF5Q86SE9 256 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 ARHGAP24Q8N264 748 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 ZNF611Q8N823 705 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 PAPD5Q8NDF8 572 aaKnown RBP3.23□□□□□ -1.89
RFC4-213ENST00000489028 OR2T6Q8NHC8 308 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 MOSPD2Q8NHP6 518 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 PTPMT1Q8WUK0 201 aaPredicted RBP3.23□□□□□ -1.89
RFC4-213ENST00000489028 NSUN4Q96CB9 384 aaKnown RBP3.23□□□□□ -1.89
RFC4-213ENST00000489028 POM121L2Q96KW2 1035 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 NEK1Q96PY6 1258 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 RSF1Q96T23 1441 aaPredicted RBP3.23□□□□□ -1.89
RFC4-213ENST00000489028 SDF4Q9BRK5 362 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 BTBD10Q9BSF8 475 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 LMF2Q9BU23 707 aaKnown RBP3.23□□□□□ -1.89
RFC4-213ENST00000489028 KIFC3Q9BVG8 833 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 FNDC11Q9BVV2 318 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 S1PR5Q9H228 398 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 FLRT3Q9NZU0 649 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 KLHL8Q9P2G9 620 aaPredicted RBP3.23□□□□□ -1.89
RFC4-213ENST00000489028 SWAP70Q9UH65 585 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 CACNA1FO60840 1977 aa3.23□□□□□ -1.89
RFC4-213ENST00000489028 ZNF644Q9H582 1327 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms