RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 GRID1Q9ULK0 1009 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 SLC8A2Q9UPR5 921 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FOXA2Q9Y261 457 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 NUDCQ9Y266 331 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 DDX49Q9Y6V7 483 aaKnown RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 TTC41PQ6P2S7 1318 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 WDR19Q8NEZ3 1342 aa3.32□□□□□ -1.88
PRPF4-203ENST00000488937 FNDC1Q4ZHG4 1894 aaPredicted RBP3.32□□□□□ -1.88
PRPF4-203ENST00000488937 HEG1Q9ULI3 1381 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 LINC00854A0A1B0GVQ3 168 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CPED1A4D0V7 1026 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM8BA6NDV4 472 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM221A6NGB7 291 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TTC34A8MYJ7 566 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 H0YGN5 161 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 KIF2AO00139 706 aaPredicted RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 MAP2K7O14733 419 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 RNF113AO15541 343 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 LANCL1O43813 399 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ERLIN1O75477 346 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 SCGB2A1O75556 95 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 NCR1O76036 304 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PGLSO95336 258 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PAHP00439 452 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ICAM1P05362 532 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PLA2G4BP0C869 781 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CBSLP0DN79 551 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 SRD5A1P18405 259 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 NR1D1P20393 614 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CYP2A7P20853 494 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 GALP22466 123 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PSMB4P28070 264 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PTPN6P29350 595 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 HOXC9P31274 260 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CBSP35520 551 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 DEKP35659 375 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CXCR3P49682 368 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ETV1P50549 477 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ASCL1P50553 236 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 POLR2LP62875 67 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CXADRP78310 365 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CYP4F2P78329 520 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 MECOMQ03112 1051 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 GABPB1Q06547 395 aaPredicted RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ARHGAP1Q07960 439 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 NADK2Q4G0N4 442 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TREML2Q5T2D2 321 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CCNYL2Q5T2Q4 361 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF618Q5T7W0 954 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TEDDM1Q5T9Z0 273 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 DCAF12L2Q5VW00 463 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 WBP2NLQ6ICG8 309 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 FOXR2Q6PJQ5 311 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 MACC1Q6ZN28 852 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TAS2R42Q7RTR8 314 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PIGWQ7Z7B1 504 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TRIM74Q86UV6 250 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TRIM73Q86UV7 250 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 HAPLN4Q86UW8 402 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 KLBQ86Z14 1044 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CAMK1DQ8IU85 385 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ARHGEF19Q8IW93 802 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 SFTPA1Q8IWL2 248 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 SRRM1Q8IYB3 904 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 KLHDC8AQ8IYD2 350 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM132CQ8N3T6 1108 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 GALNT16Q8N428 558 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ZCCHC9Q8N567 271 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 EXD1Q8NHP7 514 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 DQX1Q8TE96 717 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 FAR1Q8WVX9 515 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 AP2M1Q96CW1 435 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 SPATA33Q96N06 139 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PSKH2Q96QS6 385 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ZNF347Q96SE7 839 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 SECISBP2Q96T21 854 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PCDHB18PQ96TA0 734 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ACOX2Q99424 681 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CPNE1Q99829 537 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 ADGRE3Q9BY15 652 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TPSD1Q9BZJ3 242 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 NACAP1Q9BZK3 213 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 EGLN1Q9GZT9 426 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 LSG1Q9H089 658 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TMEM117Q9H0C3 514 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CLSTN2Q9H4D0 955 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 AKIP1Q9NQ31 210 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PPANQ9NQ55 473 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PANK4Q9NVE7 773 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 RBM28Q9NW13 759 aaKnown RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 TAS2R14Q9NYV8 317 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 PSME2Q9UL46 239 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 SIRT4Q9Y6E7 314 aaPredicted RBP3.31□□□□□ -1.88
PRPF4-203ENST00000488937 A3GALT2U3KPV4 340 aa3.31□□□□□ -1.88
PRPF4-203ENST00000488937 CNTNAP2Q9UHC6 1331 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 CENPVL1A0A0U1RR11 272 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 DUXAA6NLW8 204 aa3.3□□□□□ -1.88
PRPF4-203ENST00000488937 KBTBD13C9JR72 458 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms