RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 FMO4P31512 558 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 EIF3BP55884 814 aaKnown RBP15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 ETF1P62495 437 aaKnown RBP15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 DR1Q01658 176 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 VAC14Q08AM6 782 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 IL11RAQ14626 422 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 SYTL3Q4VX76 610 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 RNF187Q5TA31 235 aaPredicted RBP15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 ARHGAP40Q5TG30 622 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 IZUMO3Q5VZ72 239 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 FBXO38Q6PIJ6 1188 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 PCGF5Q86SE9 256 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 AMIGO1Q86WK6 493 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 KMT5CQ86Y97 462 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 IGDCC3Q8IVU1 814 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 D2HGDHQ8N465 521 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 OR5K2Q8NHB8 316 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 RUNDC3BQ96NL0 473 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 OR6C1Q96RD1 312 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 TSSK1BQ9BXA7 367 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 PLAC1Q9HBJ0 212 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 PCDHB11Q9Y5F2 797 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 MAD1L1Q9Y6D9 718 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 FAM169AQ9Y6X4 670 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 LOC400499M0QZD8 3231 aa15.48■□□□□ 0.07
CTDSP1-209ENST00000488627 UBA6A0AVT1 1052 aaPredicted RBP15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 TTI1O43156 1089 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 BANF1O75531 89 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 DLGAP3O95886 979 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 APOA4P06727 396 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 F7P08709 466 aaPredicted RBP15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 FGF5P12034 268 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 PRDX3P30048 256 aaKnown RBP15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 PAFAH1B1P43034 410 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 FOXM1Q08050 763 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 GBX1Q14549 363 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 KCNAB1Q14722 419 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 DNAJC21Q5F1R6 531 aaKnown RBP15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 ARMC6Q6NXE6 501 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 UNC5AQ6ZN44 842 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 VASH2Q86V25 355 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 DENND6AQ8IWF6 608 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 CARFQ8N187 725 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 OTUD6BQ8N6M0 293 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 STAMBPL1Q96FJ0 436 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 PANX3Q96QZ0 392 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 TRIM51Q9BSJ1 452 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 MENTQ9BUN1 341 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 PITPNM3Q9BZ71 974 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 TRIT1Q9H3H1 467 aaKnown RBP15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 LATS2Q9NRM7 1088 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 GALPQ9UBC7 116 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 POLG2Q9UHN1 485 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 CRYL1Q9Y2S2 319 aa15.47■□□□□ 0.07
CTDSP1-209ENST00000488627 MGAQ8IWI9 3026 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 NBEAQ8NFP9 2946 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 MATN2O00339 956 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 RAD1O60671 282 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 NIPSNAP2O75323 286 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 STK17BO94768 372 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 ZBTB11O95625 1053 aaPredicted RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 ESR1P03372 595 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 ZNF28P17035 718 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 HSD11B2P80365 405 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 DHX9Q08211 1270 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 ABRQ12979 859 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 PRKAA1Q13131 559 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 CTBP1Q13363 440 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 GRB7Q14451 532 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 MORF4L2Q15014 288 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 LONRF1Q17RB8 773 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 HIBCHQ6NVY1 386 aaPredicted RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 CCDC81Q6ZN84 652 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 UNC5BQ8IZJ1 945 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 SIDT2Q8NBJ9 832 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 FLVCR1-AS1Q8TAF5 88 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 PWWP2AQ96N64 755 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 BBC3Q96PG8 261 aaPredicted RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 EBNA1BP2Q99848 306 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 WDR83Q9BRX9 315 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 C1GALT1Q9NS00 363 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 C20orf96Q9NUD7 363 aaPredicted RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 INTS10Q9NVR2 710 aaKnown RBP15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 BTRCQ9Y297 605 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 MED16Q9Y2X0 877 aa15.46■□□□□ 0.07
CTDSP1-209ENST00000488627 TEX51A0A1B0GUA7 166 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 SLC9B1P1A6NJY1 282 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 H3BMM5 538 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 KPNA5O15131 536 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 SEC31AO94979 1220 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 TIAF1O95411 115 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 EBLN1P0CF75 366 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 PKMP14618 531 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 PGAM1P18669 254 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 CASQ1P31415 396 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 SHMT2P34897 504 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 THOC5Q13769 683 aaKnown RBP15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 KYNUQ16719 465 aa15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.45■□□□□ 0.06
CTDSP1-209ENST00000488627 SOWAHCQ53LP3 525 aaPredicted RBP15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms