RNA–Protein interactions for RNA: ENST00000488337.5

SIK3-212, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 4,220 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-212ENST00000488337 HNRNPDLO14979 420 aaKnown RBP6.25□□□□□ -1.41
SIK3-212ENST00000488337 INPPL1O15357 1258 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 AVILO75366 819 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 PRKCGP05129 697 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 CD63P08962 238 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 FCGR1AP12314 374 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 TMEM11P17152 192 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 CD58P19256 250 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 EEF1B2P24534 225 aaKnown RBP6.25□□□□□ -1.41
SIK3-212ENST00000488337 NUDT2P50583 147 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 BCAT1P54687 386 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 ARPP19P56211 112 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 AP1S1P61966 158 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 RPL6Q02878 288 aaKnown RBP6.25□□□□□ -1.41
SIK3-212ENST00000488337 ZNF33AQ06730 810 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 CHAF1BQ13112 559 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 ILKQ13418 452 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 CAMK1Q14012 370 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 TMEM132BQ14DG7 1078 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 TRAM2Q15035 370 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 MSS51Q4VC12 460 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 XKR9Q5GH70 373 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 RSBN1LQ6PCB5 846 aaPredicted RBP6.25□□□□□ -1.41
SIK3-212ENST00000488337 C16orf62Q7Z3J2 963 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 TAB3Q8N5C8 712 aaPredicted RBP6.25□□□□□ -1.41
SIK3-212ENST00000488337 CHURC1Q8WUH1 139 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 LENG9Q96B70 501 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 NECTIN4Q96NY8 510 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 MMP19Q99542 508 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 BTBD1Q9H0C5 482 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 C11orf49Q9H6J7 331 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 WDR41Q9HAD4 459 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 PNPLA8Q9NP80 782 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 UFSP2Q9NUQ7 469 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 SMPD3Q9NY59 655 aaPredicted RBP6.25□□□□□ -1.41
SIK3-212ENST00000488337 KIF25Q9UIL4 384 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 HACL1Q9UJ83 578 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 VAV3Q9UKW4 847 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 GAB2Q9UQC2 676 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 ARAP2Q8WZ64 1704 aa6.25□□□□□ -1.41
SIK3-212ENST00000488337 SYNJ2BP-COX16A0A087WUM0 186 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 IGKV6D-41A0A0C4DH26 115 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 CLDN24A6NM45 220 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 SLC7A4O43246 635 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 DCXO43602 365 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PEX10O60683 326 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 RASGRP1O95267 797 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 CHRM5P08912 532 aaPredicted RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 HOXC4P09017 264 aaPredicted RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 EDN3P14138 238 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 TAL1P17542 331 aaPredicted RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 NOS3P29474 1203 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 KCNK10P57789 538 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 DEFA1P59665 94 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 DEFA3P59666 94 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 NCS1P62166 190 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 FMO1Q01740 532 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PTP4A2Q12974 167 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 ALKBH1Q13686 389 aaKnown RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 BAK1Q16611 211 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 SULT1C3Q6IMI6 304 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 C3orf33Q6P1S2 294 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 ATRAIDQ6UW56 229 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 SLC51AQ86UW1 340 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 CBWD2Q8IUF1 395 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 ZSCAN18Q8TBC5 510 aaPredicted RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 SFT2D1Q8WV19 159 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 APBB2Q92870 758 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PAK6Q9NQU5 681 aaPredicted RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 ANKEF1Q9NU02 776 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 POLLQ9UGP5 575 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 ZNRF3Q9ULT6 936 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PCDHGC4Q9Y5F7 938 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PCDHGB7Q9Y5F8 929 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PCDHGA6Q9Y5G7 932 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PCDHGA5Q9Y5G8 931 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PCDHGA1Q9Y5H4 931 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 CNTNAP2Q9UHC6 1331 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 hCG_1807616A0A1W2PRN6 198 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 E2F8A0AVK6 867 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 ZNF99A8MXY4 864 aaPredicted RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 PPEF2O14830 753 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 SGCEO43556 437 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 WDR47O94967 919 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 VAPBO95292 243 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 MT-ND3P03897 115 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 ALPLP05186 524 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 SERPINF2P08697 491 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PTBP1P26599 531 aaKnown RBP eCLIP6.24□□□□□ -1.411e-9■■■■■ 32.9
SIK3-212ENST00000488337 KPNA2P52292 529 aaKnown RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 HNRNPKP61978 463 aaKnown RBP eCLIP6.24□□□□□ -1.41
SIK3-212ENST00000488337 DMP1Q13316 513 aaPredicted RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 EFCAB12Q6NXP0 572 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 MAP4K3Q8IVH8 894 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 ABI1Q8IZP0 508 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 PLD5Q8N7P1 536 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 FAM181AQ8N9Y4 354 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 SHC3Q92529 594 aa6.24□□□□□ -1.41
SIK3-212ENST00000488337 CPNE4Q96A23 557 aaPredicted RBP6.24□□□□□ -1.41
SIK3-212ENST00000488337 PDLIM5Q96HC4 596 aaKnown RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms