RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 USP10Q14694 798 aaKnown RBP15.33■□□□□ 0.04
C9orf3-219ENST00000488186 NR1D2Q14995 579 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 EFTUD2Q15029 972 aaKnown RBP eCLIP15.33■□□□□ 0.04
C9orf3-219ENST00000488186 HES3Q5TGS1 186 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 NKAIN2Q5VXU1 208 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 LRRC8EQ6NSJ5 796 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 ARMC6Q6NXE6 501 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 WDR93Q6P2C0 686 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 RBM44Q6ZP01 1051 aaKnown RBP15.33■□□□□ 0.04
C9orf3-219ENST00000488186 TAOK1Q7L7X3 1001 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 TMPRSS12Q86WS5 348 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 CPNE9Q8IYJ1 553 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 MYO1HQ8N1T3 1032 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 CHCHD4Q8N4Q1 142 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 RAB42Q8N4Z0 105 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 OR5AR1Q8NGP9 310 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 OR5K2Q8NHB8 316 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 CD200R1Q8TD46 325 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 JPH3Q8WXH2 748 aaPredicted RBP15.33■□□□□ 0.04
C9orf3-219ENST00000488186 DEPDC7Q96QD5 511 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 RBBP8Q99708 897 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 HGH1Q9BTY7 390 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 PARD6BQ9BYG5 372 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 KIR3DX1Q9H7L2 352 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 CLCA2Q9UQC9 943 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 MTO1Q9Y2Z2 717 aaKnown RBP15.33■□□□□ 0.04
C9orf3-219ENST00000488186 NEUROG3Q9Y4Z2 214 aa15.33■□□□□ 0.04
C9orf3-219ENST00000488186 EXOC1LA0A1B0GW35 172 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 PABPN1LA6NDY0 278 aaKnown RBP15.32■□□□□ 0.04
C9orf3-219ENST00000488186 RIPK2O43353 540 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 TCEA3O75764 348 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 FAM155BO75949 473 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 CPNE6O95741 557 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 MPC1LP0DKB6 136 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 CD9P21926 228 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 FDXRP22570 491 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 MAP4P27816 1152 aaKnown RBP15.32■□□□□ 0.04
C9orf3-219ENST00000488186 CD1CP29017 333 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 CCNFP41002 786 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 PAQR3Q6TCH7 311 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 TMPRSS7Q7RTY8 843 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 OR4E2Q8NGC2 313 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 EEF1AKMT1Q8WVE0 214 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 SLC30A3Q99726 388 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 DPYSL5Q9BPU6 564 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 SRMSQ9H3Y6 488 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 SYTL2Q9HCH5 934 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 SLC24A2Q9UI40 661 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 ANGPTL2Q9UKU9 493 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 ATXN7L1Q9ULK2 861 aaPredicted RBP15.32■□□□□ 0.04
C9orf3-219ENST00000488186 UNC13CQ8NB66 2214 aa15.32■□□□□ 0.04
C9orf3-219ENST00000488186 A0A1W2PQM1 296 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 TMX2-CTNND1H3BSU7 103 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 EIF3FO00303 357 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-219ENST00000488186 ZBTB14O43829 449 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 CATP04040 527 aaKnown RBP15.31■□□□□ 0.04
C9orf3-219ENST00000488186 ABHD2P08910 425 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 STMN1P16949 149 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 LIMK2P53671 638 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 PRKAA1Q13131 559 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 SLC29A2Q14542 456 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 CLPPQ16740 277 aaPredicted RBP15.31■□□□□ 0.04
C9orf3-219ENST00000488186 LGSNQ5TDP6 509 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 NEK10Q6ZWH5 1172 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 RAPH1Q70E73 1250 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 OOSP2Q86WS3 158 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 PLXDC1Q8IUK5 500 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 DCUN1D3Q8IWE4 304 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 NKAPQ8N5F7 415 aaKnown RBP15.31■□□□□ 0.04
C9orf3-219ENST00000488186 OR52E1Q8NGJ3 308 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 GIMAP7Q8NHV1 300 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 RAD51AP1Q96B01 352 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 LINGO1Q96FE5 620 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 OLFM1Q99784 485 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 FUT8Q9BYC5 575 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 TFB2MQ9H5Q4 396 aaKnown RBP15.31■□□□□ 0.04
C9orf3-219ENST00000488186 RDH14Q9HBH5 336 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 GPAMQ9HCL2 828 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 MED16Q9Y2X0 877 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 ACACBO00763 2458 aa15.31■□□□□ 0.04
C9orf3-219ENST00000488186 OR6C74A6NCV1 312 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 NTN3O00634 580 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-219ENST00000488186 HYAL3O43820 417 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-219ENST00000488186 C1QAP02745 245 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 ITGA2BP08514 1039 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 SERPINB9P50453 376 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 CLDN6P56747 220 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 TAS2R39P59534 338 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 GBX1Q14549 363 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 UBAP2Q5T6F2 1119 aaKnown RBP15.3■□□□□ 0.04
C9orf3-219ENST00000488186 PHF19Q5T6S3 580 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 MROH9Q5TGP6 573 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 IRGCQ6NXR0 463 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 EMBQ6PCB8 327 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 UBE2R2Q712K3 238 aaPredicted RBP15.3■□□□□ 0.04
C9orf3-219ENST00000488186 AMIGO1Q86WK6 493 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 GRAMD1AQ96CP6 724 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 ZDHHC12Q96GR4 267 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 TMEM74Q96NL1 305 aa15.3■□□□□ 0.04
C9orf3-219ENST00000488186 PAFAH2Q99487 392 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms