RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 TRIOO75962 3097 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 TCRBV21S2A2A0A5A6 115 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 KRT87PA6NCN2 255 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 H3BM21 787 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 CCNT2O60583 730 aaKnown RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 POP7O75817 140 aaKnown RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PRR35P0CG20 571 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 MYCLP1P12525 358 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 GABRG2P18507 467 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 EPORP19235 508 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 IGFALSP35858 605 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 MAGEA9P43362 315 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PIK3CGP48736 1102 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 CCR3P51677 355 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 PLOD1Q02809 727 aaPredicted RBP9.22□□□□□ -0.93
SF3B1-211ENST00000487698 SGCGQ13326 291 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 CRTC3Q6UUV7 619 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 RINLQ6ZS11 566 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 OR4F6Q8NGB9 312 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 KLK6Q92876 244 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 CATSPER2Q96P56 530 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 CDK15Q96Q40 435 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 BTBD10Q9BSF8 475 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 NTMT1Q9BV86 223 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 SLC32A1Q9H598 525 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 CD93Q9NPY3 652 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 TAS2R1Q9NYW7 299 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 TIMM22Q9Y584 194 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 LRP4O75096 1905 aa9.22□□□□□ -0.93
SF3B1-211ENST00000487698 ATP6AP2A0A1C7CYW4 349 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 PRR23AA6NEV1 266 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 MAN2B1O00754 1011 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 GIPC1O14908 333 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 ATP6AP2O75787 350 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 CATP04040 527 aaKnown RBP9.21□□□□□ -0.94
SF3B1-211ENST00000487698 KRT16P08779 473 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 IL9P15248 144 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 EPB42P16452 691 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 PIK3R1P27986 724 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 CPA2P48052 419 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 TPMTP51580 245 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 SFSWAPQ12872 951 aaKnown RBP9.21□□□□□ -0.94
SF3B1-211ENST00000487698 ABRQ12979 859 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 GPR153Q6NV75 609 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 DOK6Q6PKX4 331 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 KIAA1324Q6UXG2 1013 aaKnown RBP9.21□□□□□ -0.94
SF3B1-211ENST00000487698 FAM83HQ6ZRV2 1179 aaPredicted RBP9.21□□□□□ -0.94
SF3B1-211ENST00000487698 Q6ZS52 159 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 RNF165Q6ZSG1 346 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 LRRTM4Q86VH4 590 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 TRIM69Q86WT6 500 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 KLHDC8AQ8IYD2 350 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 CFAP206Q8IYR0 622 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 CDYL2Q8N8U2 506 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 DCBLD1Q8N8Z6 715 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 FBXO27Q8NI29 283 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 HMGCLL1Q8TB92 370 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 FOXJ1Q92949 421 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 MARK4Q96L34 752 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D10AQ9BXI6 508 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 C1QTNF7Q9BXJ2 289 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 DPEP2Q9H4A9 486 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 AKTIPQ9H8T0 292 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 PHPT1Q9NRX4 125 aaPredicted RBP9.21□□□□□ -0.94
SF3B1-211ENST00000487698 POLG2Q9UHN1 485 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 NDRG2Q9UN36 371 aaKnown RBP9.21□□□□□ -0.94
SF3B1-211ENST00000487698 BTRCQ9Y297 605 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 NCKAP1Q9Y2A7 1128 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 OR1A2Q9Y585 309 aa9.21□□□□□ -0.94
SF3B1-211ENST00000487698 DNMT3AQ9Y6K1 912 aaPredicted RBP9.21□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3DA0A087WVF3 549 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3IA0A087WXS9 549 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3EA0A087X179 549 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3KA0A087X1G2 549 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PABPN1LA6NDY0 278 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3FA6NER0 549 aaPredicted RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3LB9A6J9 549 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 UBDO15205 165 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 VPS4BO75351 444 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CRCPO75575 148 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CHEK2O96017 543 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CAPN1P07384 714 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 ALDOCP09972 364 aaKnown RBP9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TBC1D3HP0C7X1 549 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 LINC00032P0C843 101 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 EBLN1P0CF75 366 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CHRNB1P11230 501 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 ACADMP11310 421 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CD1EP15812 388 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 ACADLP28330 430 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 BDKRB1P46663 353 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 ATP4BP51164 291 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CCNG1P51959 295 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 RPA4Q13156 261 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 NFE2L1Q14494 772 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 HERC3Q15034 1050 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PTCHD3Q3KNS1 767 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 PLA2G4EQ3MJ16 856 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 CCSMST1Q4G0I0 132 aa9.2□□□□□ -0.94
SF3B1-211ENST00000487698 TCHHL1Q5QJ38 904 aaPredicted RBP9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms