RNA–Protein interactions for RNA: ENST00000487476.5

NF1-211, Transcript of neurofibromin 1, humanhuman

TSL 1 (best) BASIC

Gene NF1, Length 2,265 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-211ENST00000487476 ABCF3Q9NUQ8 709 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 MKS1Q9NXB0 559 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 CIDEBQ9UHD4 219 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 RAB23Q9ULC3 237 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 GRID1Q9ULK0 1009 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 PRAMEF33A0A0G2JMD5 474 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 OR52A4PA6NMU1 304 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 PDZK1P1A8MUH7 402 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 PRPF4O43172 522 aaKnown RBP eCLIP16.48■□□□□ 0.232e-6■■■■□ 26.6
NF1-211ENST00000487476 IDSP22304 550 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 HOXD12P35452 270 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 PI4KAP42356 2102 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 RPA4Q13156 261 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 ACAP2Q15057 778 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 HLA-BQ31612 363 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 SUMF1Q8NBK3 374 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 ARMC2Q8NEN0 867 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 DYDC1Q8WWB3 177 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 ASB11Q8WXH4 323 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 DPEP2Q9H4A9 486 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 ERVMER34-1Q9H9K5 563 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 TAAR2Q9P1P5 351 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 XPR1Q9UBH6 696 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 ACSL5Q9ULC5 683 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 FANCMQ8IYD8 2048 aa16.48■□□□□ 0.23
NF1-211ENST00000487476 TDRD6O60522 2096 aaKnown RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 SNX3O60493 162 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 PLIN3O60664 434 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 MATN4O95460 622 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 PHKG1Q16816 387 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 TECRLQ5HYJ1 363 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 DUS1LQ6P1R4 473 aaKnown RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 SLC23A3Q6PIS1 610 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 SBSNQ6UWP8 590 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 PDZD3Q86UT5 571 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 ZNF548Q8NEK5 533 aaPredicted RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 CEP76Q8TAP6 659 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 MAGEC3Q8TD91 643 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 DENND1AQ8TEH3 1009 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 PATE1Q8WXA2 126 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 EXT2Q93063 718 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 KIAA1191Q96A73 305 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 LOXL4Q96JB6 756 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 TSNARE1Q96NA8 513 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 INSM2Q96T92 566 aaPredicted RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 ELF4Q99607 663 aaPredicted RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 IQCGQ9H095 443 aaKnown RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 UTP6Q9NYH9 597 aaKnown RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 MCM8Q9UJA3 840 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 KLHL33A6NCF5 533 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 EIF3FO00303 357 aaPredicted RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 KCNJ13O60928 360 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 PIAS2O75928 621 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 PROCP04070 461 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 MPC1LP0DKB6 136 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 ATP6V0D1P61421 351 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 HNRNPKP61978 463 aaKnown RBP eCLIP16.47■□□□□ 0.231e-10■■■■■ 42.3
NF1-211ENST00000487476 PLOD1Q02809 727 aaPredicted RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 TSNAXIP1Q2TAA8 658 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 CCSMST1Q4G0I0 132 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 CAPRIN2Q6IMN6 1127 aaKnown RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 LVRNQ6Q4G3 990 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 CCDC63Q8NA47 563 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 ATOH1Q92858 354 aaPredicted RBP16.47■□□□□ 0.23
NF1-211ENST00000487476 NRTNQ99748 197 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 GSDMCQ9BYG8 508 aa16.47■□□□□ 0.23
NF1-211ENST00000487476 A6NCN8 305 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 GFYI3L273 518 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 ATP6V1G2O95670 118 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 SLC35G4P0C7Q5 338 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 PPP1R3AQ16821 1122 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 UAP1L1Q3KQV9 507 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 KLC3Q6P597 504 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 MBOAT1Q6ZNC8 495 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 NEK10Q6ZWH5 1172 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 UBE2R2Q712K3 238 aaPredicted RBP16.46■□□□□ 0.23
NF1-211ENST00000487476 SLC25A45Q8N413 288 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 FAM46DQ8NEK8 389 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 TFGQ92734 400 aaPredicted RBP16.46■□□□□ 0.23
NF1-211ENST00000487476 C12orf66Q96MD2 445 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 ATOH8Q96SQ7 321 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 TFB2MQ9H5Q4 396 aaKnown RBP16.46■□□□□ 0.23
NF1-211ENST00000487476 FGFR1OP2Q9NVK5 253 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 SLC6A14Q9UN76 642 aa16.46■□□□□ 0.23
NF1-211ENST00000487476 NEMP2A6NFY4 417 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 NCF1BA6NI72 391 aaPredicted RBP16.45■□□□□ 0.22
NF1-211ENST00000487476 NCF1CA8MVU1 366 aaPredicted RBP16.45■□□□□ 0.22
NF1-211ENST00000487476 TCP11X1B4DZS4 312 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 TARM1B6A8C7 271 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 YY2O15391 372 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 AQP9O43315 295 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 NCF1P14598 390 aaPredicted RBP16.45■□□□□ 0.22
NF1-211ENST00000487476 ETV4P43268 484 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 BDKRB1P46663 353 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 WDR4P57081 412 aaKnown RBP16.45■□□□□ 0.22
NF1-211ENST00000487476 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.45■□□□□ 0.22
NF1-211ENST00000487476 RASGRP3Q8IV61 690 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 OR5AR1Q8NGP9 310 aa16.45■□□□□ 0.22
NF1-211ENST00000487476 MRPL57Q9BQC6 102 aaKnown RBP16.45■□□□□ 0.22
NF1-211ENST00000487476 GAREM1Q9H706 876 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms