RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-215ENST00000487401 SCN8AQ9UQD0 1980 aa12.08□□□□□ -0.48
SREBF1-215ENST00000487401 COL6A6A6NMZ7 2263 aa12.08□□□□□ -0.48
SREBF1-215ENST00000487401 SPTA1P02549 2419 aa12.08□□□□□ -0.48
SREBF1-215ENST00000487401 SDK2Q58EX2 2172 aa12.08□□□□□ -0.48
SREBF1-215ENST00000487401 SETXQ7Z333 2677 aaKnown RBP12.07□□□□□ -0.48
SREBF1-215ENST00000487401 HEATR9A2RTY3 570 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 OR51F1A6NGY5 319 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 LIASO43766 372 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 ST6GAL1P15907 406 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 PSMA3P25788 255 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 CDC25BP30305 580 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 PPARGP37231 505 aaPredicted RBP12.07□□□□□ -0.48
SREBF1-215ENST00000487401 GPS2Q13227 327 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 PLEKHS1Q5SXH7 462 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 PRAMEF17Q5VTA0 474 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 AFTPHQ6ULP2 937 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 PACS1Q6VY07 963 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 NLRP9Q7RTR0 991 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 SLC13A5Q86YT5 568 aaPredicted RBP12.07□□□□□ -0.48
SREBF1-215ENST00000487401 SLC38A9Q8NBW4 561 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 OR6P1Q8NGX9 317 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 OR1L3Q8NH93 324 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 C1orf54Q8WWF1 131 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 HDAC10Q969S8 669 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 TRAPPC9Q96Q05 1148 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 PITPNM3Q9BZ71 974 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 KLHL25Q9H0H3 589 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 ACTR5Q9H9F9 607 aaPredicted RBP12.07□□□□□ -0.48
SREBF1-215ENST00000487401 POLG2Q9UHN1 485 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 GUCA1BQ9UMX6 200 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 TDRKHQ9Y2W6 561 aaKnown RBP12.07□□□□□ -0.48
SREBF1-215ENST00000487401 PRSS21Q9Y6M0 314 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 CAPN6Q9Y6Q1 641 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 BSNQ9UPA5 3926 aa12.07□□□□□ -0.48
SREBF1-215ENST00000487401 E7EQ34 232 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 KRT86O43790 486 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 KDM1AO60341 852 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 SUN1O94901 812 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 HBQ1P09105 142 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 RAB40ALP0C0E4 278 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 PVRP15151 417 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 NR1D1P20393 614 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 ADRA1DP25100 572 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 SHMT2P34897 504 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 CCL11P51671 97 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 ITGA1P56199 1179 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 FOXK1P85037 733 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 ABRQ12979 859 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 SEMA5AQ13591 1074 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 SNX1Q13596 522 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 RPS6KA1Q15418 735 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 OASLQ15646 514 aaKnown RBP12.06□□□□□ -0.48
SREBF1-215ENST00000487401 IGFBP7Q16270 282 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 COLEC12Q5KU26 742 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 TSTD2Q5T7W7 516 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 IZUMO3Q5VZ72 239 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 SPESP1Q6UW49 350 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 UNC5AQ6ZN44 842 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 APLFQ8IW19 511 aaPredicted RBP12.06□□□□□ -0.48
SREBF1-215ENST00000487401 TBC1D21Q8IYX1 336 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 ADGRF3Q8IZF5 1079 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 DSELQ8IZU8 1212 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 CCDC89Q8N998 374 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 OR5AR1Q8NGP9 310 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 OR4L1Q8NH43 312 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 NRTNQ99748 197 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 TSSK1BQ9BXA7 367 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 ACSS2Q9NR19 701 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 RAB6BQ9NRW1 208 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 SNX7Q9UNH6 387 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 ICKQ9UPZ9 632 aa12.06□□□□□ -0.48
SREBF1-215ENST00000487401 TLN1Q9Y490 2541 aaKnown RBP12.05□□□□□ -0.48
SREBF1-215ENST00000487401 ARGFXA6NJG6 315 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 K7EM74 188 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 OR1I1O60431 355 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 GOT2P00505 430 aaKnown RBP12.05□□□□□ -0.48
SREBF1-215ENST00000487401 APRTP07741 180 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 MSL3P1P0C860 447 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 AGXTP21549 392 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 ACADLP28330 430 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 FOXN2P32314 431 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 PRAMEP78395 509 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 FASTKD1Q53R41 847 aaKnown RBP12.05□□□□□ -0.48
SREBF1-215ENST00000487401 LCN10Q6JVE6 187 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 NAPRTQ6XQN6 538 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 TRIM73Q86UV7 250 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 SYTL1Q8IYJ3 562 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 GPR135Q8IZ08 494 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 ENDOVQ8N8Q3 282 aaKnown RBP12.05□□□□□ -0.48
SREBF1-215ENST00000487401 OR13J1Q8NGT2 312 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 TCTN2Q96GX1 697 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 RANBP9Q96S59 729 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 NLNQ9BYT8 704 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 PCMTD2Q9NV79 361 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 OR6C2Q9NZP2 312 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 PAK5Q9P286 719 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 SLC2A6Q9UGQ3 507 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 ANAPC5Q9UJX4 755 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 RIMKLBQ9ULI2 386 aa12.05□□□□□ -0.48
SREBF1-215ENST00000487401 SLC5A10A0PJK1 596 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms