RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 PRDX3P30048 256 aaKnown RBP17.14■□□□□ 0.33
COL6A1-204ENST00000486023 CCR7P32248 378 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 ABHD18Q0P651 414 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 TPSAB1Q15661 275 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 ANKRD22Q5VYY1 191 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 CYB5D1Q6P9G0 228 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 ZNF843Q8N446 348 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 EXD3Q8N9H8 876 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 LKAAEAR1Q8TD35 194 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 SKA2Q8WVK7 121 aaPredicted RBP17.14■□□□□ 0.33
COL6A1-204ENST00000486023 SLC12A9Q9BXP2 914 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 TFB2MQ9H5Q4 396 aaKnown RBP17.14■□□□□ 0.33
COL6A1-204ENST00000486023 TSR3Q9UJK0 312 aaKnown RBP17.14■□□□□ 0.33
COL6A1-204ENST00000486023 CROTQ9UKG9 612 aa17.14■□□□□ 0.33
COL6A1-204ENST00000486023 SLC5A10A0PJK1 596 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 ZNF891A8MT65 544 aaPredicted RBP17.13■□□□□ 0.33
COL6A1-204ENST00000486023 MAP3K7O43318 606 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 PVRP15151 417 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 F8A1P23610 371 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 STAT5AP42229 794 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 TTPAP49638 278 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 EIF3BP55884 814 aaKnown RBP17.13■□□□□ 0.33
COL6A1-204ENST00000486023 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.13■□□□□ 0.33
COL6A1-204ENST00000486023 ATP1A1-AS1Q5TC04 95 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 FAM199XQ6PEV8 388 aaPredicted RBP17.13■□□□□ 0.33
COL6A1-204ENST00000486023 SDCCAG8Q86SQ7 713 aaPredicted RBP17.13■□□□□ 0.33
COL6A1-204ENST00000486023 TRIM73Q86UV7 250 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 KMT5CQ86Y97 462 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 TMEM126BQ8IUX1 230 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 VRK3Q8IV63 474 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 MPP5Q8N3R9 675 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 C2orf73Q8N5S3 287 aaPredicted RBP17.13■□□□□ 0.33
COL6A1-204ENST00000486023 GSDMBQ8TAX9 411 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 PEX13Q92968 403 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 FAM136AQ96C01 138 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 WBP1Q96G27 269 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 TRIM56Q9BRZ2 755 aaKnown RBP17.13■□□□□ 0.33
COL6A1-204ENST00000486023 EFHD1Q9BUP0 239 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 KCND1Q9NSA2 647 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 TREX1Q9NSU2 369 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 ACTR10Q9NZ32 417 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 POMT2Q9UKY4 750 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 PADI1Q9ULC6 663 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 ICKQ9UPZ9 632 aa17.13■□□□□ 0.33
COL6A1-204ENST00000486023 C2orf74A8MZ97 194 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 PRMT5O14744 637 aaPredicted RBP17.12■□□□□ 0.33
COL6A1-204ENST00000486023 ITGB2P05107 769 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 APOA4P06727 396 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 TCN2P20062 427 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 ACADLP28330 430 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 FMO4P31512 558 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 CDK16Q00536 496 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 PLOD1Q02809 727 aaPredicted RBP17.12■□□□□ 0.33
COL6A1-204ENST00000486023 KCNJ11Q14654 390 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 PRAMEF17Q5VTA0 474 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 UNC5AQ6ZN44 842 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 ZNF605Q86T29 641 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 TBC1D21Q8IYX1 336 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 ADGRF3Q8IZF5 1079 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 D2HGDHQ8N465 521 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 LMNTD1Q8N9Z9 388 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 ASZ1Q8WWH4 475 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 STARD8Q92502 1023 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 CPT1BQ92523 772 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 MED8Q96G25 268 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 SLC45A3Q96JT2 553 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 KIFC1Q9BW19 673 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 CARD6Q9BX69 1037 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 C1GALT1Q9NS00 363 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 IL1RAPL1Q9NZN1 696 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 SAMD15Q9P1V8 674 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 SEMA5BQ9P283 1151 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 POLG2Q9UHN1 485 aa17.12■□□□□ 0.33
COL6A1-204ENST00000486023 GOLGA6L10A0A0M3HER8 536 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 PIPSLA2A3N6 862 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 ISM1B1AKI9 464 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 MATN2O00339 956 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 SCRG1O75711 98 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 ST6GAL1P15907 406 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 TUBB4BP68371 445 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 TUBB2AQ13885 445 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 ERV3-1Q14264 604 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 TMED2Q15363 201 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 PPP1R7Q15435 360 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 DEFB109BQ30KR1 87 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 MRNIPQ6NTE8 343 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 BORAQ6PGQ7 559 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 CAND1Q86VP6 1230 aaKnown RBP17.11■□□□□ 0.33
COL6A1-204ENST00000486023 N4BP2L2Q92802 583 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-204ENST00000486023 SGSM3Q96HU1 749 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 CAPZA3Q96KX2 299 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 TUBB2BQ9BVA1 445 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 SLC7A5P2Q9GIP4 190 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 AKIRIN1Q9H9L7 192 aaPredicted RBP17.11■□□□□ 0.33
COL6A1-204ENST00000486023 FANCEQ9HB96 536 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 SPHK1Q9NYA1 384 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 GNPTGQ9UJJ9 305 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 SNX12Q9UMY4 172 aa17.11■□□□□ 0.33
COL6A1-204ENST00000486023 SOX13Q9UN79 622 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms