RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 SIGLEC10Q96LC7 697 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 TRIM56Q9BRZ2 755 aaKnown RBP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 TRIM51Q9BSJ1 452 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 P2RY12Q9H244 342 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 PPANQ9NQ55 473 aaKnown RBP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 KCND1Q9NSA2 647 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 TSR3Q9UJK0 312 aaKnown RBP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 RALYQ9UKM9 306 aaKnown RBP12.16□□□□□ -0.46
PTCD1-205ENST00000485746 RARRES3Q9UL19 164 aa12.16□□□□□ -0.46
PTCD1-205ENST00000485746 PIPSLA2A3N6 862 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 EIF4E1BA6NMX2 242 aaKnown RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 SMAPO00193 183 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 BTN3A1O00481 513 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 ZBTB11O95625 1053 aaPredicted RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 TTC4O95801 387 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 ESR1P03372 595 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 PKMP14618 531 aaKnown RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 MAP4P27816 1152 aaKnown RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 SHMT2P34897 504 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 MAGEA3P43357 314 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 KPNA2P52292 529 aaKnown RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 ITGA8P53708 1063 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 ARL4CP56559 192 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 HSD11B2P80365 405 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 CTBP1Q13363 440 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 TUBB3Q13509 450 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 IL11RAQ14626 422 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 KCNAB1Q14722 419 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 TYSND1Q2T9J0 566 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 PLEKHS1Q5SXH7 462 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 MAATS1Q7Z4T9 603 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 TMEM135Q86UB9 458 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 VASH2Q86V25 355 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 KCNMB4Q86W47 210 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 KMT5CQ86Y97 462 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 CILP2Q8IUL8 1156 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 VRK3Q8IV63 474 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 SLC22A15Q8IZD6 547 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 RAB42Q8N4Z0 105 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 OR5K2Q8NHB8 316 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 N4BP2L2Q92802 583 aaPredicted RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 FAM136AQ96C01 138 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 RNF31Q96EP0 1072 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 CFAP36Q96G28 342 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 FAM167BQ9BTA0 163 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 ULBP3Q9BZM4 244 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 PRORYQ9H606 182 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 FANCEQ9HB96 536 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 FBXO6Q9NRD1 293 aaPredicted RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 IARS2Q9NSE4 1012 aaKnown RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 INTS10Q9NVR2 710 aaKnown RBP12.15□□□□□ -0.46
PTCD1-205ENST00000485746 ACTR10Q9NZ32 417 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 SLC39A10Q9ULF5 831 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 PLAGL1Q9UM63 463 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 MRFAP1Q9Y605 127 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 UNC13CQ8NB66 2214 aa12.15□□□□□ -0.46
PTCD1-205ENST00000485746 COL27A1Q8IZC6 1860 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 ZNF106Q9H2Y7 1883 aaKnown RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 MAP1BP46821 2468 aaKnown RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 ZCWPW2A0A1B0GU75 182 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 SLC9B1P1A6NJY1 282 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 ISM1B1AKI9 464 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 BTN3A3O00478 584 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 NIPSNAP2O75323 286 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 GPC4O75487 556 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 BANF1O75531 89 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 STK17BO94768 372 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 SLCO2B1O94956 709 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 EBLN1P0CF75 366 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 FOLR1P15328 257 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 PRDX3P30048 256 aaKnown RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 HSP90AA5PQ58FG0 334 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 SPANXN3Q5MJ09 141 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 CTSL3PQ5NE16 218 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 HP1BP3Q5SSJ5 553 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 FBXO38Q6PIJ6 1188 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 UNC5AQ6ZN44 842 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 PPP1R3BQ86XI6 285 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 DENND6AQ8IWF6 608 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 LMNTD2Q8IXW0 634 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 NLGN4XQ8N0W4 816 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 BBOF1Q8ND07 529 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 NLGN4YQ8NFZ3 816 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 MAGEC3Q8TD91 643 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 LPGAT1Q92604 370 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 KIAA1143Q96AT1 154 aaPredicted RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 SLC41A2Q96JW4 573 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 NRTNQ99748 197 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 EBNA1BP2Q99848 306 aaKnown RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 NAT9Q9BTE0 207 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 KLHL25Q9H0H3 589 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 C1GALT1Q9NS00 363 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 SIDT1Q9NXL6 827 aaKnown RBP12.14□□□□□ -0.47
PTCD1-205ENST00000485746 LNPEPQ9UIQ6 1025 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 POMT2Q9UKY4 750 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 ICKQ9UPZ9 632 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 SNX24Q9Y343 169 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 FAM169AQ9Y6X4 670 aa12.14□□□□□ -0.47
PTCD1-205ENST00000485746 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
PTCD1-205ENST00000485746 ZFC3H1O60293 1989 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms