RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, human

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN1-215	ENST00000485550	ARHGEF18	Q6ZSZ5	1173 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	SNX20	Q7Z614	316 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	TMTC1	Q8IUR5	882 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	TMEM126B	Q8IUX1	230 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	NXPE1	Q8N323	547 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	D2HGDH	Q8N465	521 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	FAM71D	Q8N9W8	422 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	MR1	Q95460	341 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	ZNF501	Q96CX3	271 aa	Predicted RBP	10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	LINC00615	Q96LM1	132 aa	Predicted RBP	10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	PANX2	Q96RD6	677 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	TLR10	Q9BXR5	811 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	SLC29A3	Q9BZD2	475 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	KLHL25	Q9H0H3	589 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	RBSN	Q9H1K0	784 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	ACTL8	Q9H568	366 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	KIR3DX1	Q9H7L2	352 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	SLAMF7	Q9NQ25	335 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	KCND1	Q9NSA2	647 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	EFR3B	Q9Y2G0	817 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	COLEC10	Q9Y6Z7	277 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	PKDREJ	Q9NTG1	2253 aa		10.28	□□□□□ -0.76
HMGN1-215	ENST00000485550	GSAP	A4D1B5	854 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	ARGFX	A6NJG6	315 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	AGAP14	A8MT82	685 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	CFAP99	D6REC4	459 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	SCRG1	O75711	98 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZBTB11	O95625	1053 aa	Predicted RBP	10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	FTCD	O95954	541 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PRF1	P14222	555 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	CDH3	P22223	829 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	GRN	P28799	593 aa	Known RBP	10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PDHA2	P29803	388 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PTPN7	P35236	360 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	HADHA	P40939	763 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PRLHR	P49683	370 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	GDF10	P55107	478 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	TUBB4B	P68371	445 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PDE1B	Q01064	536 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PRKAA1	Q13131	559 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PRKG2	Q13237	762 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	TUBB2A	Q13885	445 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	POU6F1	Q14863	301 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	NR6A1	Q15406	480 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	TMTC4	Q5T4D3	741 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	JMJD6	Q6NYC1	403 aa	Predicted RBP	10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PEX26	Q7Z412	305 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	KIAA1328	Q86T90	577 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	SERPINA9	Q86WD7	417 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	KMT5C	Q86Y97	462 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	CLDN19	Q8N6F1	224 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	LRRC57	Q8N9N7	239 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550		Q8NA96	180 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	SLC38A9	Q8NBW4	561 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	HM13	Q8TCT9	377 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZFPM2	Q8WW38	1151 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	LCN9	Q8WX39	176 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	ULK4	Q96C45	1275 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	C19orf60	Q96EN9	201 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	C5orf34	Q96MH7	638 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	CD180	Q99467	661 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	CCM2	Q9BSQ5	444 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	TUBB2B	Q9BVA1	445 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	SRMS	Q9H3Y6	488 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	XKR8	Q9H6D3	395 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	COG4	Q9H9E3	785 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	ARNT2	Q9HBZ2	717 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	ACSS2	Q9NR19	701 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	ZDHHC3	Q9NYG2	299 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	AMFR	Q9UKV5	643 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	FARSA	Q9Y285	508 aa	Known RBP	10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	PCDHGA6	Q9Y5G7	932 aa		10.27	□□□□□ -0.77
HMGN1-215	ENST00000485550	DOCK10	Q96BY6	2186 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	ANKRD12	Q6UB98	2062 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	TCRBV7S2A1N4T	A0A589	114 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	KLHL33	A6NCF5	533 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	GOLGA6L9	A6NEM1	432 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	OR51F1	A6NGY5	319 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	BTNL10	A8MVZ5	291 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	C21orf140	B9A014	251 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	IFRD1	O00458	451 aa	Predicted RBP	10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	BTN3A3	O00478	584 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	KRT86	O43790	486 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	CPNE3	O75131	537 aa	Known RBP	10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	PVR	P15151	417 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	NDUFS1	P28331	727 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	PRDX3	P30048	256 aa	Known RBP	10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	PREP	P48147	710 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	LMAN1	P49257	510 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	VAV2	P52735	878 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	RPS15	P62841	145 aa	Known RBP	10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	GPS2	Q13227	327 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	BRD3	Q15059	726 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	PARP6	Q2NL67	630 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	GPR33	Q49SQ1	333 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	FAM69B	Q5VUD6	431 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	KCTD11	Q693B1	232 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	LCN10	Q6JVE6	187 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	NAPRT	Q6XQN6	538 aa		10.26	□□□□□ -0.77
HMGN1-215	ENST00000485550	BPHL	Q86WA6	291 aa	Predicted RBP	10.26	□□□□□ -0.77

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