RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 TRBC1P01850 177 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 C1SP09871 688 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ELFN1P0C7U0 828 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF883P0CG24 379 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 DGKAP23743 735 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 FMO4P31512 558 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 PFN3P60673 137 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ATP6V0D1P61421 351 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 PRKAA1Q13131 559 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 SLC14A1Q13336 389 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 RCN2Q14257 317 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF460Q14592 562 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 INPP5AQ14642 412 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 PTPRCAPQ14761 206 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ACOX1Q15067 660 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 TBCCQ15814 346 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 DEFB133Q30KQ1 61 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 GALNTL6Q49A17 601 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 TMEM52BQ4KMG9 183 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF789Q5FWF6 425 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ERAP2Q6P179 960 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 NEK5Q6P3R8 708 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 DBX2Q6ZNG2 339 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 DPPA4Q7L190 304 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 LYSMD3Q7Z3D4 306 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 RD3Q7Z3Z2 195 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 PIWIL4Q7Z3Z4 852 aaKnown RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 C10orf67Q8IYJ2 551 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 TTC30BQ8N4P2 665 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 NKAPQ8N5F7 415 aaKnown RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF548Q8NEK5 533 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 PIH1D2Q8WWB5 315 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 TSACCQ96A04 125 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 RAB7BQ96AH8 199 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 KLHL29Q96CT2 875 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 LENG8Q96PV6 779 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 RAB3IPQ96QF0 476 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 OLFM1Q99784 485 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 GATA5Q9BWX5 397 aaPredicted RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 DRC3Q9H069 523 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 EML4Q9HC35 981 aaKnown RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 BPIFA1Q9NP55 256 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 IL17CQ9P0M4 197 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 FTSJ1Q9UET6 329 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 VTI1BQ9UEU0 232 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 TRMT6Q9UJA5 497 aaKnown RBP6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ANGPTL2Q9UKU9 493 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 LOC400499M0QZD8 3231 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 ASXL3Q9C0F0 2248 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 EPG5Q9HCE0 2579 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 RP1P56715 2156 aa6.81□□□□□ -1.32
BRCA1-216ENST00000484087 LY6G6EA0A0G2JKS1 128 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SPTY2D1-AS1A0A0U1RR47 76 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 TMEM202A6NGA9 273 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SYCE1LA8MT33 242 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 H3BMM5 538 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 PCDHGA12O60330 932 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 LYPLA1O75608 230 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 UNC5CO95185 931 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ESR1P03372 595 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 TPBGLP0DKB5 382 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CYP2A6P11509 494 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 PKMP14618 531 aaKnown RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ZNF7P17097 686 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 JUNDP17535 347 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 TFEBP19484 476 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CHRM3P20309 590 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CD9P21926 228 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SERPINB3P29508 390 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 HNF1BP35680 557 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 GMPRP36959 345 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SPAM1P38567 509 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 GRK6P43250 576 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ARRB1P49407 418 aaPredicted RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 RPL14P50914 215 aaKnown RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SUOXP51687 545 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 NAGLUP54802 743 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ADARP55265 1226 aaKnown RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CDKN2DP55273 166 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 DNAJB13P59910 316 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 NAA20P61599 178 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ELP6Q0PNE2 266 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ARHGEF7Q14155 803 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SEMA3AQ14563 771 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 KRT72Q14CN4 511 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ALG11Q2TAA5 492 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 GPR33Q49SQ1 333 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 TECRLQ5HYJ1 363 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 LRRC66Q68CR7 880 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 PTRHD1Q6GMV3 140 aaKnown RBP6.8□□□□□ -1.32
BRCA1-216ENST00000484087 BRAT1Q6PJG6 821 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 DOK6Q6PKX4 331 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 ENPP7Q6UWV6 458 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 Q6ZVL8 140 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 SNX20Q7Z614 316 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CLNKQ7Z7G1 428 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 PARGQ86W56 976 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 HID1Q8IV36 788 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 PHACTR4Q8IZ21 702 aa6.8□□□□□ -1.32
BRCA1-216ENST00000484087 CBARPQ8N350 705 aaPredicted RBP6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms