RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 SLC13A2Q13183 592 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 CARTPTQ16568 116 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 C5orf22Q49AR2 442 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 CTSL3PQ5NE16 218 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 RNF19BQ6ZMZ0 732 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 CLIP4Q8N3C7 705 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 FEM1AQ9BSK4 669 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 TP63Q9H3D4 680 aaPredicted RBP17.73■□□□□ 0.43
SSR4-209ENST00000482902 NECTIN3Q9NQS3 549 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 VPS9D1Q9Y2B5 631 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 ARIH1Q9Y4X5 557 aaPredicted RBP17.73■□□□□ 0.43
SSR4-209ENST00000482902 A6NL46 340 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 NTRK1P04629 796 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 EIF2DP41214 584 aaKnown RBP17.73■□□□□ 0.43
SSR4-209ENST00000482902 SERPINB10P48595 397 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 TPD52P55327 224 aaPredicted RBP17.73■□□□□ 0.43
SSR4-209ENST00000482902 C6orf136Q5SQH8 315 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 NEK10Q6ZWH5 1172 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 ADCK1Q86TW2 530 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 LACC1Q8IV20 430 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 EFHBQ8N7U6 833 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 CD200R1Q8TD46 325 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 NSMCE2Q96MF7 247 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 CDK15Q96Q40 435 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 BPIFA1Q9NP55 256 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 ZIM2Q9NZV7 527 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 PCDHGC4Q9Y5F7 938 aa17.73■□□□□ 0.43
SSR4-209ENST00000482902 FAM234BA2RU67 622 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 E2F3O00716 465 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 KDELR3O43731 214 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 TBC1D4O60343 1298 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 VNN2O95498 520 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 ZDHHC11BP0C7U3 371 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 PCNAP12004 261 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 CR2P20023 1033 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 ACVR2AP27037 513 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 TTPAP49638 278 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 LSM3P62310 102 aaKnown RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 ZRANB3Q5FWF4 1079 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 HABP4Q5JVS0 413 aaKnown RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 CCSAPQ6IQ19 270 aaPredicted RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 RSPO2Q6UXX9 243 aaPredicted RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 PJA1Q8NG27 643 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 LILRB4Q8NHJ6 448 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 GLMNQ92990 594 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 SPATA17Q96L03 361 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 MOV10Q9HCE1 1003 aaKnown RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 SARS2Q9NP81 518 aaKnown RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 SLCO3A1Q9UIG8 710 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 ANKRD36A6QL64 1941 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 TULP3O75386 442 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 CKBP12277 381 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 CCND3P30281 292 aaPredicted RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 ARL1P40616 181 aaPredicted RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 FLT3LGP49771 235 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 IST1P53990 364 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 CDH4P55283 916 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 VBP1P61758 197 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 EMX1Q04741 257 aaPredicted RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 DUSP4Q13115 394 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 TOP3AQ13472 1001 aaPredicted RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 MBTPS1Q14703 1052 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 ATP6AP1LQ52LC2 224 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 MFSD4BQ5TF39 518 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 GALNT13Q8IUC8 556 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 OR52B6Q8NGF0 335 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 PROKR1Q8TCW9 393 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 HTRA1Q92743 480 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 AGO1Q9UL18 857 aaKnown RBP17.72■□□□□ 0.43
SSR4-209ENST00000482902 RAI2Q9Y5P3 530 aa17.72■□□□□ 0.43
SSR4-209ENST00000482902 PTGES3LE9PB15 166 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 H3BNC9 293 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 RAP2AP10114 183 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 PSMA3P25788 255 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 MTHFRP42898 656 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 PPP5CP53041 499 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 ERVPABLB-1P60509 514 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 FAM189BP81408 668 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 EMX2Q04743 252 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 KCNAB2Q13303 367 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 GPR17Q13304 367 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 PTPRRQ15256 657 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 ANKRD34AQ69YU3 496 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 GLYATQ6IB77 296 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 ZDHHC13Q8IUH4 622 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 RAVER1Q8IY67 606 aaKnown RBP17.71■□□□□ 0.43
SSR4-209ENST00000482902 SDCCAG3Q96C92 435 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 YIPF6Q96EC8 236 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 ZNF300Q96RE9 604 aaPredicted RBP17.71■□□□□ 0.43
SSR4-209ENST00000482902 CCDC90BQ9GZT6 254 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 ILVBLA1L0T0 632 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 E5RI56 91 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 KCNK2O95069 426 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 ENO2P09104 434 aaPredicted RBP17.71■□□□□ 0.43
SSR4-209ENST00000482902 ALDH7A1P49419 539 aaKnown RBP17.71■□□□□ 0.43
SSR4-209ENST00000482902 ISL1P61371 349 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 PPP2R2BQ00005 443 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 GPR162Q16538 588 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 Q6ZSR9 355 aa17.71■□□□□ 0.43
SSR4-209ENST00000482902 ZFAND4Q86XD8 727 aa17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms