RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 ATXN7O15265 892 aaPredicted RBP14.39□□□□□ -0.11
OPTN-210ENST00000482140 MAP3K7O43318 606 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 KIAA0754O94854 1291 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 RPN2P04844 631 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 EBLN1P0CF75 366 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 FGF5P12034 268 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 RPS3P23396 243 aaKnown RBP eCLIP14.39□□□□□ -0.11
OPTN-210ENST00000482140 ACADLP28330 430 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 SHMT2P34897 504 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 DHX34Q14147 1143 aaKnown RBP14.39□□□□□ -0.11
OPTN-210ENST00000482140 KCNAB1Q14722 419 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 ESX1Q8N693 406 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 OR5K2Q8NHB8 316 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 LKAAEAR1Q8TD35 194 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 RNF31Q96EP0 1072 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 STAMBPL1Q96FJ0 436 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 SERPINB12Q96P63 405 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 BBC3Q96PG8 261 aaPredicted RBP14.39□□□□□ -0.11
OPTN-210ENST00000482140 EFHD1Q9BUP0 239 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 XKR8Q9H6D3 395 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 GPN2Q9H9Y4 310 aaPredicted RBP14.39□□□□□ -0.11
OPTN-210ENST00000482140 C1GALT1Q9NS00 363 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 LNPEPQ9UIQ6 1025 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 POMT2Q9UKY4 750 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 PCDHGA4Q9Y5G9 962 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 SAR1BQ9Y6B6 198 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 MAD1L1Q9Y6D9 718 aa14.39□□□□□ -0.11
OPTN-210ENST00000482140 FAM237BA0A1B0GVD1 139 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 BHMG1C9JSJ3 638 aaPredicted RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 BTN3A3O00478 584 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 SPAG6O75602 509 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 DLGAP3O95886 979 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 LIFP15018 202 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 FOLR1P15328 257 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 OGNP20774 298 aaKnown RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 ARNTP27540 789 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 AOAHP28039 575 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 FMO4P31512 558 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 PAFAH1B1P43034 410 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 ABHD18Q0P651 414 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 THOC5Q13769 683 aaKnown RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 MAP7Q14244 749 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.38□□□□□ -0.11
OPTN-210ENST00000482140 DNAJC21Q5F1R6 531 aaKnown RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 C6orf15Q6UXA7 325 aaPredicted RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 OTOAQ7RTW8 1153 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 TIPARPQ7Z3E1 657 aaKnown RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 PCGF5Q86SE9 256 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 BPHLQ86WA6 291 aaPredicted RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 SLC22A15Q8IZD6 547 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 D2HGDHQ8N465 521 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 NAT8LQ8N9F0 302 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 LSM14AQ8ND56 463 aaKnown RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 CFAP61Q8NHU2 1237 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 SKA2Q8WVK7 121 aaPredicted RBP14.38□□□□□ -0.11
OPTN-210ENST00000482140 SLC39A7Q92504 469 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 RUNDC3BQ96NL0 473 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 TCF12Q99081 682 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 SPRY4Q9C004 299 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 P2RY12Q9H244 342 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 FANCEQ9HB96 536 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 FGF21Q9NSA1 209 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 ICKQ9UPZ9 632 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 VPS9D1Q9Y2B5 631 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 RPS6KL1Q9Y6S9 549 aa14.38□□□□□ -0.11
OPTN-210ENST00000482140 NBEAQ8NFP9 2946 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 PIPSLA2A3N6 862 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 SLC9B1P1A6NJY1 282 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 H3BMM5 538 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 TK2O00142 265 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 GPC4O75487 556 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 MT-ND3P03897 115 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 ZNF28P17035 718 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 PRDX3P30048 256 aaKnown RBP14.37□□□□□ -0.11
OPTN-210ENST00000482140 TUBB4BP68371 445 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 ABRQ12979 859 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 PTK6Q13882 451 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 TUBB2AQ13885 445 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 TYSND1Q2T9J0 566 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 ANKRD20A4Q4UJ75 823 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 NEPROQ6NW34 567 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 FBXO38Q6PIJ6 1188 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 VRK3Q8IV63 474 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 KLHL7Q8IXQ5 586 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 ADGRF3Q8IZF5 1079 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 GALNT6Q8NCL4 622 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 PPM1MQ96MI6 270 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 TUBB2BQ9BVA1 445 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 ACTR10Q9NZ32 417 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 PCYOX1Q9UHG3 505 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 BTRCQ9Y297 605 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 CRYL1Q9Y2S2 319 aa14.37□□□□□ -0.11
OPTN-210ENST00000482140 LOC101059948A0A1B0GTJ6 334 aa14.36□□□□□ -0.11
OPTN-210ENST00000482140 ZNF891A8MT65 544 aaPredicted RBP14.36□□□□□ -0.11
OPTN-210ENST00000482140 E5RI56 91 aa14.36□□□□□ -0.11
OPTN-210ENST00000482140 DNALI1O14645 258 aaPredicted RBP14.36□□□□□ -0.11
OPTN-210ENST00000482140 CCNYL3P0C7X3 344 aa14.36□□□□□ -0.11
OPTN-210ENST00000482140 WT1P19544 449 aaPredicted RBP14.36□□□□□ -0.11
OPTN-210ENST00000482140 STAT5AP42229 794 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms