RNA–Protein interactions for RNA: ENST00000480353.5

CDK9-203, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 706 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-203ENST00000480353 ZSCAN12O43309 604 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 SLC28A2O43868 658 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 NTRK1P04629 796 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 KLK3P07288 261 aaPredicted RBP14.89□□□□□ -0.03
CDK9-203ENST00000480353 PSMA3P25788 255 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 PRDX3P30048 256 aaKnown RBP14.89□□□□□ -0.03
CDK9-203ENST00000480353 RPS15P62841 145 aaKnown RBP14.89□□□□□ -0.03
CDK9-203ENST00000480353 CRADDP78560 199 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 CDK16Q00536 496 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 HSPA14Q0VDF9 509 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 DEFB109BQ30KR1 87 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 PWWP2BQ6NUJ5 590 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 CASC4Q6P4E1 433 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 FBXO38Q6PIJ6 1188 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 NAPRTQ6XQN6 538 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 SDCCAG8Q86SQ7 713 aaPredicted RBP14.89□□□□□ -0.03
CDK9-203ENST00000480353 TBC1D21Q8IYX1 336 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 EXD3Q8N9H8 876 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 OR5AR1Q8NGP9 310 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 SKA2Q8WVK7 121 aaPredicted RBP14.89□□□□□ -0.03
CDK9-203ENST00000480353 MAGOHBQ96A72 148 aaKnown RBP14.89□□□□□ -0.03
CDK9-203ENST00000480353 CLIP3Q96DZ5 547 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 ZNF778Q96MU6 729 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 PANX3Q96QZ0 392 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 ADNPQ9H2P0 1102 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 LHX9Q9NQ69 397 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 ACTR10Q9NZ32 417 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 SAMD15Q9P1V8 674 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 GNPTGQ9UJJ9 305 aa14.89□□□□□ -0.03
CDK9-203ENST00000480353 MRPS18BQ9Y676 258 aaKnown RBP14.89□□□□□ -0.03
CDK9-203ENST00000480353 GOLGA6L10A0A0M3HER8 536 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 GOLGA6L3A6NEY3 463 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 TMEM150CB9EJG8 249 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 BTN3A3O00478 584 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 PRMT5O14744 637 aaPredicted RBP14.88□□□□□ -0.03
CDK9-203ENST00000480353 PAMP19021 973 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 TPSB2P20231 275 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 CYP2A7P20853 494 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 MGAT1P26572 445 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 POLE2P56282 527 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 ACVR1Q04771 509 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 GPS1Q13098 491 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 DNASE1L3Q13609 305 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 ERV3-1Q14264 604 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 TPSAB1Q15661 275 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 MRNIPQ6NTE8 343 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 LRRC8BQ6P9F7 803 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 TTC23LQ6PF05 361 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 OR5K2Q8NHB8 316 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 CFAP61Q8NHU2 1237 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 APOBEC4Q8WW27 367 aaKnown RBP14.88□□□□□ -0.03
CDK9-203ENST00000480353 ASZ1Q8WWH4 475 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 CPT1BQ92523 772 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 MR1Q95460 341 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 TWSG1Q9GZX9 223 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 GRPEL1Q9HAV7 217 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 SYTL2Q9HCH5 934 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 IRAK4Q9NWZ3 460 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 SERTAD3Q9UJW9 196 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 BTRCQ9Y297 605 aa14.88□□□□□ -0.03
CDK9-203ENST00000480353 ATMQ13315 3056 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 CDC14CA4D256 554 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 ISM1B1AKI9 464 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 C21orf140B9A014 251 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 KPNA5O15131 536 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 TIAF1O95411 115 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 KRT14P02533 472 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 PLA2G2AP14555 144 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 KCNAB2Q13303 367 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 DNAJC21Q5F1R6 531 aaKnown RBP14.87□□□□□ -0.03
CDK9-203ENST00000480353 SPESP1Q6UW49 350 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 ZNF534Q76KX8 674 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 LDB1Q86U70 411 aaPredicted RBP14.87□□□□□ -0.03
CDK9-203ENST00000480353 GPR135Q8IZ08 494 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 MPP5Q8N3R9 675 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 RAB42Q8N4Z0 105 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 CT55Q8WUE5 264 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 SEC14L1Q92503 715 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 SGSM3Q96HU1 749 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 PPM1MQ96MI6 270 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 CARD6Q9BX69 1037 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 AP1M1Q9BXS5 423 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 KLHL25Q9H0H3 589 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 SLC25A18Q9H1K4 315 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 GEMIN8Q9NWZ8 242 aaKnown RBP14.87□□□□□ -0.03
CDK9-203ENST00000480353 SYBUQ9NX95 663 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 POLHQ9Y253 713 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 SMG1Q96Q15 3661 aaKnown RBP14.87□□□□□ -0.03
CDK9-203ENST00000480353 COL6A6A6NMZ7 2263 aa14.87□□□□□ -0.03
CDK9-203ENST00000480353 SLC5A10A0PJK1 596 aa14.86□□□□□ -0.03
CDK9-203ENST00000480353 J3QKU1 62 aa14.86□□□□□ -0.03
CDK9-203ENST00000480353 PGRMC1O00264 195 aaKnown RBP14.86□□□□□ -0.03
CDK9-203ENST00000480353 KIF5CO60282 957 aa14.86□□□□□ -0.03
CDK9-203ENST00000480353 ST6GAL1P15907 406 aa14.86□□□□□ -0.03
CDK9-203ENST00000480353 NMBRP28336 390 aa14.86□□□□□ -0.03
CDK9-203ENST00000480353 OAS2P29728 719 aaKnown RBP14.86□□□□□ -0.03
CDK9-203ENST00000480353 EIF3BP55884 814 aaKnown RBP14.86□□□□□ -0.03
CDK9-203ENST00000480353 ABRQ12979 859 aa14.86□□□□□ -0.03
CDK9-203ENST00000480353 ZNF658BQ4V348 819 aaPredicted RBP14.86□□□□□ -0.03
CDK9-203ENST00000480353 CRTC2Q53ET0 693 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms