RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 XRCC4Q13426 336 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 ZIC1Q15915 447 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 SLC5A12Q1EHB4 618 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 VWA3BQ502W6 1294 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 PPP6R3Q5H9R7 873 aaPredicted RBP7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 CREBRFQ8IUR6 639 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 CHERPQ8IWX8 916 aaKnown RBP7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 ZNF655Q8N720 491 aaPredicted RBP7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 RASGEF1AQ8N9B8 481 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 LILRB4Q8NHJ6 448 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 BRSK1Q8TDC3 778 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 NSMCE1Q8WV22 266 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 FKBP10Q96AY3 582 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 C12orf66Q96MD2 445 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 MCEEQ96PE7 176 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 VPS35Q96QK1 796 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 NRTNQ99748 197 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 SNRNP25Q9BV90 132 aaKnown RBP7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 STK33Q9BYT3 514 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 CHRNA10Q9GZZ6 450 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 RNF32Q9H0A6 362 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 ZFYVE1Q9HBF4 777 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 RAD18Q9NS91 495 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 PCSK1NQ9UHG2 260 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 PLEKHA6Q9Y2H5 1048 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 DNMT3AQ9Y6K1 912 aaPredicted RBP7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 AKAP6Q13023 2319 aa7.04□□□□□ -1.28
SPTLC1-205ENST00000477888 CACNA1CQ13936 2221 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 NKX2-6A6NCS4 301 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 VSTM2BA6NLU5 285 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 F8VZ95 297 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 BTN3A1O00481 513 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 ZNHIT1O43257 154 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 PRPSAP2O60256 369 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 PRAMEF1O95521 474 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 LY6G6DO95868 133 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 CALB1P05937 261 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 PRR35P0CG20 571 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 UCHL3P15374 230 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 AMPD1P23109 780 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 DNASE1P24855 282 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 NSFP46459 744 aaKnown RBP7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 ZNF135P52742 658 aaPredicted RBP7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 TMPRSS15P98073 1019 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 DEFB110Q30KQ9 67 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 ATP13A5Q4VNC0 1218 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 ATG9BQ674R7 924 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 TLDC1Q6P9B6 456 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 C3P1Q6ZMU1 363 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 SHISA6Q6ZSJ9 500 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 COX15Q7KZN9 410 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 MON1BQ7L1V2 547 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 CAMKMTQ7Z624 323 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 PSTKQ8IV42 348 aaKnown RBP7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 KBTBD2Q8IY47 623 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 ATPAF2Q8N5M1 289 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 BEND7Q8N7W2 519 aaPredicted RBP7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 CCDC110Q8TBZ0 833 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 BRIX1Q8TDN6 353 aaKnown RBP7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 POLDIP3Q9BY77 421 aaKnown RBP7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 UCK2Q9BZX2 261 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 WWP1Q9H0M0 922 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 SRMSQ9H3Y6 488 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 ZNF160Q9HCG1 818 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 TXLNGQ9NUQ3 528 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 COQ3Q9NZJ6 369 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 PPT2Q9UMR5 302 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 SHOC2Q9UQ13 582 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 LUC7L2Q9Y383 392 aaKnown RBP7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 COLEC10Q9Y6Z7 277 aa7.03□□□□□ -1.28
SPTLC1-205ENST00000477888 ANKRD62A6NC57 917 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 OR5H15A6NDH6 313 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 FAM171A2A8MVW0 826 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 ASNA1O43681 348 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 SERPINA7P05543 415 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 MMP2P08253 660 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 MYBL2P10244 700 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 ALAS2P22557 587 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 FDXRP22570 491 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 CA4P22748 312 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 NDUFS1P28331 727 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 PCSK6P29122 969 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 MIPP30301 263 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 SPAM1P38567 509 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 DGKQP52824 942 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 MYBPHQ13203 477 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 OLIG2Q13516 323 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 GTF2H3Q13889 308 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 RBBP7Q16576 425 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 CLEC16AQ2KHT3 1053 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 DNAJC24Q6P3W2 148 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 TMEM220Q6QAJ8 160 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 TMCO3Q6UWJ1 677 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 POLNQ7Z5Q5 900 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 KRTAP1-3Q8IUG1 177 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 LRRC49Q8IUZ0 686 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 SIAH3Q8IW03 269 aa7.02□□□□□ -1.29
SPTLC1-205ENST00000477888 ELOA2Q8IYF1 753 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms