RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 VPS18Q9P253 973 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 OAS3Q9Y6K5 1087 aaKnown RBP11.33□□□□□ -0.6
LSM2-212ENST00000477182 ITPR3Q14573 2671 aa11.33□□□□□ -0.6
LSM2-212ENST00000477182 OR1I1O60431 355 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 HAUS5O94927 633 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 AHSGP02765 367 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 LIFP15018 202 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 GABRB3P28472 473 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 GCAP28676 217 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 TRIM23P36406 574 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 UQCRFS1P47985 274 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 BLKP51451 505 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 MLLT10P55197 1068 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 PFN3P60673 137 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 B4GALNT1Q00973 533 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 IFFO1Q0D2I5 559 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 ITIH4Q14624 930 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 CASP8Q14790 479 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 ELOCQ15369 112 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 LDLRAP1Q5SW96 308 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 RNF187Q5TA31 235 aaPredicted RBP11.32□□□□□ -0.6
LSM2-212ENST00000477182 DOK6Q6PKX4 331 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 PACS1Q6VY07 963 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 KIAA0408Q6ZU52 694 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 DDHD1Q8NEL9 900 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 NAT14Q8WUY8 206 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 SLC44A1Q8WWI5 657 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 JPH3Q8WXH2 748 aaPredicted RBP11.32□□□□□ -0.6
LSM2-212ENST00000477182 FUBP1Q96AE4 644 aaKnown RBP11.32□□□□□ -0.6
LSM2-212ENST00000477182 ZBTB9Q96C00 473 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 COX14Q96I36 57 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 TCF12Q99081 682 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 COPS8Q99627 209 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 CPNE1Q99829 537 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 CCDC77Q9BR77 488 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 INTS10Q9NVR2 710 aaKnown RBP11.32□□□□□ -0.6
LSM2-212ENST00000477182 TXNDC16Q9P2K2 825 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 CRYL1Q9Y2S2 319 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 TMEM98Q9Y2Y6 226 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 NFS1Q9Y697 457 aa11.32□□□□□ -0.6
LSM2-212ENST00000477182 IGLV3-16A0A075B6K0 115 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 SMIM23A6NLE4 172 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 CACNB4O00305 520 aaPredicted RBP11.31□□□□□ -0.6
LSM2-212ENST00000477182 DYNC1I1O14576 645 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 PFDN6O15212 129 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 ASMTLO95671 621 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 IVLP07476 585 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 INHBAP08476 426 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 MYCLP1P12525 358 aaPredicted RBP11.31□□□□□ -0.6
LSM2-212ENST00000477182 MSH3P20585 1137 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 GNLYP22749 145 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 GP5P40197 560 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 MSH2P43246 934 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 SLCO1A2P46721 670 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 LEPRP48357 1165 aaKnown RBP11.31□□□□□ -0.6
LSM2-212ENST00000477182 CD151P48509 253 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 CSE1LP55060 971 aaKnown RBP11.31□□□□□ -0.6
LSM2-212ENST00000477182 EIF3BP55884 814 aaKnown RBP11.31□□□□□ -0.6
LSM2-212ENST00000477182 KIAA1024LP59773 190 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 YPEL5P62699 121 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 PPARDQ03181 441 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 ESPL1Q14674 2120 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 TPRG1LQ5T0D9 272 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 DET1Q7L5Y6 550 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 GALNT7Q86SF2 657 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 ADGRG6Q86SQ4 1221 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 IQCKQ8N0W5 287 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 KYQ8NBH2 561 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 EPS8L3Q8TE67 593 aaKnown RBP11.31□□□□□ -0.6
LSM2-212ENST00000477182 DCAKDQ8WVC6 231 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 LPGAT1Q92604 370 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 MOCOSQ96EN8 888 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 DCUN1D1Q96GG9 259 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 SLC45A3Q96JT2 553 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 ZIM3Q96PE6 472 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 TAAR9Q96RI9 348 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 DHRS4Q9BTZ2 278 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 EFHD1Q9BUP0 239 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 CLPBQ9H078 707 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 OR2AG1Q9H205 316 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 TCEAL2Q9H3H9 227 aaPredicted RBP11.31□□□□□ -0.6
LSM2-212ENST00000477182 PRDM8Q9NQV8 689 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 SIRPGQ9P1W8 387 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 ATXN10Q9UBB4 475 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 VPS9D1Q9Y2B5 631 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 IKBKGQ9Y6K9 419 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 PRSS21Q9Y6M0 314 aa11.31□□□□□ -0.6
LSM2-212ENST00000477182 TLDC2A0PJX2 215 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 TMEM202A6NGA9 273 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 EFCAB7A8K855 629 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 CFAP99D6REC4 459 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 TOR1BO14657 336 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 PRMT5O14744 637 aaPredicted RBP11.3□□□□□ -0.6
LSM2-212ENST00000477182 HOXC4P09017 264 aaPredicted RBP11.3□□□□□ -0.6
LSM2-212ENST00000477182 RALBP11234 206 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 PNLIPP16233 465 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 ZNF7P17097 686 aaPredicted RBP11.3□□□□□ -0.6
LSM2-212ENST00000477182 FMO4P31512 558 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 POLD2P49005 469 aa11.3□□□□□ -0.6
LSM2-212ENST00000477182 TMEM115Q12893 351 aaPredicted RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms