RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CLRN2A0PK11 232 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 KLRG2A4D1S0 409 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 PPP6CO00743 305 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 ZNF780AO75290 641 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 CYBBP04839 570 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 ITGB6P18564 788 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 PRIM2P49643 509 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 CSTF3Q12996 717 aaKnown RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 DACT2Q5SW24 774 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 CAPN13Q6MZZ7 669 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 ALKBH2Q6NS38 261 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 SYCE2Q6PIF2 218 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 ENPP6Q6UWR7 440 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 SPATA19Q7Z5L4 167 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 NECAB2Q7Z6G3 386 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 CCDC190Q86UF4 302 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 RAB43Q86YS6 212 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 SETD6Q8TBK2 473 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 MARVELD3Q96A59 401 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 CCDC115Q96NT0 180 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 RBM14Q96PK6 669 aaKnown RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 NEDD4LQ96PU5 975 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 PRRG3Q9BZD7 231 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 UCK2Q9BZX2 261 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 FAM124BQ9H5Z6 455 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 DBNDD1Q9H9R9 158 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 AIG1Q9NVV5 245 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 UBP1Q9NZI7 540 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 PCOLCE2Q9UKZ9 415 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 TMEM5Q9Y2B1 443 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 A0A0U1RQS6 177 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 KDM4FA0A1W2PPD8 638 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 PLD2O14939 933 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 VPS4BO75351 444 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 LINC00032P0C843 101 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 PRR35P0CG20 571 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 CASP2P42575 452 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 STRIP1Q5VSL9 837 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 TMEM65Q6PI78 240 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 BBS7Q8IWZ6 715 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 KLHDC8BQ8IXV7 354 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 ZBTB44Q8NCP5 570 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 ZNF540Q8NDQ6 660 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 SLC7A6Q92536 515 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 TMCO6Q96DC7 493 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 PITHD1Q9GZP4 211 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 GORASP2Q9H8Y8 452 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 RANGRFQ9HD47 186 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 MID1IP1Q9NPA3 183 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 POLR3BQ9NW08 1133 aaPredicted RBP10.38□□□□□ -0.75
ABCF1-205ENST00000475993 AASSQ9UDR5 926 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 UTS2RQ9UKP6 389 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 KCNE2Q9Y6J6 123 aa10.38□□□□□ -0.75
ABCF1-205ENST00000475993 A0A087WZ62 844 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 MEIOCA2RUB1 952 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 YDJCA8MPS7 323 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 LACTBL1A8MY62 500 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 GNGT2O14610 69 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 SLC22A3O75751 556 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 UGT2B17O75795 530 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 RAD17O75943 681 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 RPS5P46782 204 aaKnown RBP10.37□□□□□ -0.75
ABCF1-205ENST00000475993 RFX2P48378 723 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 PPP3CCP48454 512 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 POLR2JP52435 117 aaKnown RBP10.37□□□□□ -0.75
ABCF1-205ENST00000475993 UGT2B15P54855 530 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 UFM1P61960 85 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 MGAT3Q09327 533 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 SLAMF1Q13291 335 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 BAATQ14032 418 aaPredicted RBP10.37□□□□□ -0.75
ABCF1-205ENST00000475993 SEMA3AQ14563 771 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 MFSD13AQ14CX5 517 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 ALFQ53S48 1182 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 FAM26DQ5JW98 314 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 SPANXN2Q5MJ10 180 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 METTL11BQ5VVY1 283 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 RAP1GAP2Q684P5 730 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 DENND5AQ6IQ26 1287 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 KIAA1324Q6UXG2 1013 aaKnown RBP10.37□□□□□ -0.75
ABCF1-205ENST00000475993 UNC5DQ6UXZ4 953 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 DLEU7Q6UYE1 221 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 LIX1LQ8IVB5 337 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 DPP10Q8N608 796 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 SLC2A14Q8TDB8 520 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 C12orf42Q96LP6 360 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 FYTTD1Q96QD9 318 aaKnown RBP10.37□□□□□ -0.75
ABCF1-205ENST00000475993 BRINP2Q9C0B6 783 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 ROGDIQ9GZN7 287 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 ALG9Q9H6U8 611 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 SP110Q9HB58 689 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 C14orf119Q9NWQ9 140 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 TAS2R7Q9NYW3 318 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 PRKAG2Q9UGJ0 569 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 RNF6Q9Y252 685 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 TRAPPC4Q9Y296 219 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 PCDHGB2Q9Y5G2 931 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 LYVE1Q9Y5Y7 322 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 STON1Q9Y6Q2 735 aa10.37□□□□□ -0.75
ABCF1-205ENST00000475993 TRAV20A0A0B4J274 112 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms