RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, human

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKD3-208	ENST00000475912	EFNA5	P52803	228 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	GEMIN4	P57678	1058 aa	Known RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	ECT2L	Q008S8	904 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	CSTF1	Q05048	431 aa	Known RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	ARL16	Q0P5N6	197 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZNF155	Q12901	538 aa	Predicted RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	GRIK3	Q13003	919 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	VEPH1	Q14D04	833 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	OASL	Q15646	514 aa	Known RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	LPAL2	Q16609	132 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	ATP13A5	Q4VNC0	1218 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	PPP6R3	Q5H9R7	873 aa	Predicted RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	MARCH8	Q5T0T0	291 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	ARHGEF16	Q5VV41	709 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	TSSK4	Q6SA08	328 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	SLC22A25	Q6T423	547 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	MEX3B	Q6ZN04	569 aa	Known RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	TUBA1A	Q71U36	451 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	ERC1	Q8IUD2	1116 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	FAM9B	Q8IZU0	186 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	MRPL43	Q8N983	215 aa	Known RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	DNAJB3	Q8WWF6	145 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	SECISBP2L	Q93073	1101 aa	Known RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	SKA1	Q96BD8	255 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	TUBA1C	Q9BQE3	449 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	FTHL17	Q9BXU8	183 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	UNC45A	Q9H3U1	944 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	EVA1A	Q9H8M9	152 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	UBTD1	Q9HAC8	227 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	KCNS2	Q9ULS6	477 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	PADI3	Q9ULW8	664 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	MTF2	Q9Y483	593 aa	Predicted RBP	4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	CCDC171	Q6TFL3	1326 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	NRCAM	Q92823	1304 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	LAMA1	P25391	3075 aa		4.64	□□□□□ -1.67
PRKD3-208	ENST00000475912	GOLGA6L10	A0A0M3HER8	536 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	MBLAC1	A4D2B0	266 aa	Predicted RBP	4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	TSPY2	A6NKD2	308 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	TEX22	C9J3V5	150 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	GPAA1	O43292	621 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	XPNPEP2	O43895	674 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	TACC1	O75410	805 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	GALT	P07902	379 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	ATP1A3	P13637	1013 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	ETFA	P13804	333 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	MRPS6	P82932	125 aa	Known RBP	4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZBTB17	Q13105	803 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	NEDD9	Q14511	834 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	SMC1A	Q14683	1233 aa	Known RBP	4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMEM266	Q2M3C6	531 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	LETM2	Q2VYF4	491 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	WDR73	Q6P4I2	378 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	DSTYK	Q6XUX3	929 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	SMIM29	Q86T20	159 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	PCYOX1L	Q8NBM8	494 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	SPATA22	Q8NHS9	363 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	RND1	Q92730	232 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	TANK	Q92844	425 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	CD101	Q93033	1021 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	HVCN1	Q96D96	273 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	RRP36	Q96EU6	259 aa	Known RBP	4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZNF570	Q96NI8	536 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	BBS4	Q96RK4	519 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	TMEM47	Q9BQJ4	181 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	HEMGN	Q9BXL5	484 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	FAM49A	Q9H0Q0	323 aa	Predicted RBP	4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	EBF2	Q9HAK2	575 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	LRRC4	Q9HBW1	653 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	TUBE1	Q9UJT0	475 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	GMEB2	Q9UKD1	530 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	KIAA1217	Q5T5P2	1943 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	ATXN2	Q99700	1313 aa	Known RBP	4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912	IGSF9B	Q9UPX0	1349 aa		4.63	□□□□□ -1.67
PRKD3-208	ENST00000475912		A0A0G2JPF8	293 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	CCDC196	A0A1B0GTZ2	297 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	HNRNPCL3	B7ZW38	293 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	MID1	O15344	667 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	PLRG1	O43660	514 aa	Known RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	LMX1B	O60663	402 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	HNRNPCL1	O60812	293 aa	Known RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	HEXA	P06865	529 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	GOLGA8H	P0CJ92	632 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	HNRNPCL4	P0DMR1	293 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	TDGF1	P13385	188 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	CD58	P19256	250 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	TCEA1	P23193	301 aa	Known RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	ELF1	P32519	619 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	KRT9	P35527	623 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	PSMC2	P35998	433 aa	Known RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	HSD17B4	P51659	736 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	CDH15	P55291	814 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	STARD6	P59095	220 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	WTAP	Q15007	396 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	PTPN14	Q15678	1187 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	CCDC6	Q16204	474 aa		4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	CDC37	Q16543	378 aa	Predicted RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	SOWAHC	Q53LP3	525 aa	Predicted RBP	4.62	□□□□□ -1.67
PRKD3-208	ENST00000475912	ZNF766	Q5HY98	468 aa		4.62	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms