RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 WDR90Q96KV7 1748 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 UTYO14607 1347 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 USP42Q9H9J4 1324 aaKnown RBP1.56□□□□□ -2.16
CCDC39-203ENST00000473854 LOC285556D6RIA3 1793 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 PHIPQ8WWQ0 1821 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 MED23Q9ULK4 1368 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 ATRNO75882 1429 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 LCTP09848 1927 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 LOXHD1Q8IVV2 1947 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 MCM3APO60318 1980 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 MYH10P35580 1976 aa1.56□□□□□ -2.16
CCDC39-203ENST00000473854 PAPPA2Q9BXP8 1791 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ARID2Q68CP9 1835 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 MGAMO43451 1857 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 A0A0G2JNG1 304 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 A0A1W2PPR1 153 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 OR5K3A6NET4 321 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 FAM90A7PA6NKC0 464 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 FAM90A22PA8MWA6 464 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 FAM90A12PA8MX19 464 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 FAM90A23PA8MXZ1 464 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PEX12O00623 359 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PHOX2AO14813 284 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 SLC22A2O15244 555 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 FAM155BO75949 473 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 UBTFL1P0CB47 393 aaPredicted RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 MYL6BP14649 208 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ANXA7P20073 488 aaKnown RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 EDN2P20800 178 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ADD2P35612 726 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 CHKAP35790 457 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 TRAPPC10P48553 1259 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ACTR2P61160 394 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 LYZP61626 148 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 MBTD1Q05BQ5 628 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 GRIK3Q13003 919 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 OS9Q13438 667 aaPredicted RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 BLMHQ13867 455 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 KIR2DS5Q14953 304 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 KRTAP21-2Q3LI59 83 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 SGO1Q5FBB7 561 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 WLSQ5T9L3 541 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 SERTAD4-AS1Q5TG53 156 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 FBXO46Q6PJ61 603 aaPredicted RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 CPLX2Q6PUV4 134 aaKnown RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 TOM1L2Q6ZVM7 507 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PPP1R42Q7Z4L9 355 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 MAP7D3Q8IWC1 876 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ZCCHC9Q8N567 271 aaKnown RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 OR5R1Q8NH85 324 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 GTF3AQ92664 365 aaKnown RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 STAMQ92783 540 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PHF21AQ96BD5 680 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PRMT6Q96LA8 375 aaPredicted RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 BBS4Q96RK4 519 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 GAL3ST4Q96RP7 486 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PCYT2Q99447 389 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 RHNO1Q9BSD3 238 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PAGR1Q9BTK6 254 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PUS3Q9BZE2 481 aaKnown RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 TKTL2Q9H0I9 626 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 LRMDAQ9H2I8 198 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 MROH8Q9H579 483 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 APOBEC3GQ9HC16 384 aaKnown RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 BPIFA1Q9NP55 256 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 IL1RAPL2Q9NP60 686 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 HINT3Q9NQE9 182 aaKnown RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 SNTG1Q9NSN8 517 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ALKBH4Q9NXW9 302 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 IL1RAPL1Q9NZN1 696 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 KIF17Q9P2E2 1029 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 PEMTQ9UBM1 199 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 LRWD1Q9UFC0 647 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ERVK-11Q9UQG0 969 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ZNF256Q9Y2P7 627 aaPredicted RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 DDX52Q9Y2R4 599 aaKnown RBP eCLIP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 FAM96BQ9Y3D0 163 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 LSM4Q9Y4Z0 139 aaKnown RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 USP16Q9Y5T5 823 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 FLT1P17948 1338 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 UBN2Q6ZU65 1347 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 ABCC12Q96J65 1359 aa1.55□□□□□ -2.16
CCDC39-203ENST00000473854 RPAP1Q9BWH6 1393 aaPredicted RBP1.55□□□□□ -2.16
CCDC39-203ENST00000473854 DOCK1Q14185 1865 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 RLFQ13129 1914 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 DOCK3Q8IZD9 2030 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 TEX22C9J3V5 150 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 PLOD2O00469 737 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 KLK10O43240 276 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 NBNO60934 754 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 TK1P04183 234 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 HSP90AB1P08238 724 aaKnown RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 VEGFAP15692 232 aaPredicted RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 MGMTP16455 207 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 MX1P20591 662 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 AIMP1Q12904 312 aaKnown RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 FOXD4Q12950 439 aaPredicted RBP1.54□□□□□ -2.16
CCDC39-203ENST00000473854 ITPK1Q13572 414 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 GCKRQ14397 625 aa1.54□□□□□ -2.16
CCDC39-203ENST00000473854 NECTIN1Q15223 517 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms