RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 ADARP55265 1226 aaKnown RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 SH3BP2P78314 561 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 PLOD1Q02809 727 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 THOC5Q13769 683 aaKnown RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 DNAJC21Q5F1R6 531 aaKnown RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 DNTTIP2Q5QJE6 756 aaKnown RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 HP1BP3Q5SSJ5 553 aaPredicted RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 FBXO38Q6PIJ6 1188 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 LRRC69Q6ZNQ3 347 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 ASZ1Q8WWH4 475 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 LCN9Q8WX39 176 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 KLHL6Q8WZ60 621 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 PANX3Q96QZ0 392 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 MAP3K3Q99759 626 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 DDA1Q9BW61 102 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 SRMSQ9H3Y6 488 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 TFB2MQ9H5Q4 396 aaKnown RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 INTS10Q9NVR2 710 aaKnown RBP18.4■□□□□ 0.54
PTCD3-210ENST00000473829 SEMA5BQ9P283 1151 aa18.4■□□□□ 0.54
PTCD3-210ENST00000473829 LOC400499M0QZD8 3231 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 KLK10O43240 276 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 ESR1P03372 595 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 MPP1Q00013 466 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 HSP90AA5PQ58FG0 334 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 TBC1D21Q8IYX1 336 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 OR5K2Q8NHB8 316 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 DPH1Q9BZG8 443 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 B3GNT4Q9C0J1 378 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 TRIT1Q9H3H1 467 aaKnown RBP18.39■□□□□ 0.53
PTCD3-210ENST00000473829 POMT2Q9UKY4 750 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 PLAGL1Q9UM63 463 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 CHMP2BQ9UQN3 213 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 RUVBL2Q9Y230 463 aaKnown RBP18.39■□□□□ 0.53
PTCD3-210ENST00000473829 SSUH2Q9Y2M2 353 aa18.39■□□□□ 0.53
PTCD3-210ENST00000473829 FAM187AA6NFU0 413 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 TLCD2A6NGC4 264 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 ERVK-10P10266 1014 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 LIPCP11150 499 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 PKMP14618 531 aaKnown RBP18.38■□□□□ 0.53
PTCD3-210ENST00000473829 NELFEP18615 380 aaKnown RBP18.38■□□□□ 0.53
PTCD3-210ENST00000473829 ELK3P41970 407 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 RAB15P59190 212 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 ABRQ12979 859 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 SRSF6Q13247 344 aaKnown RBP18.38■□□□□ 0.53
PTCD3-210ENST00000473829 GBX1Q14549 363 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 TMED2Q15363 201 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 HIF1AQ16665 826 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 TMEM164Q5U3C3 297 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 ZNF549Q6P9A3 640 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 OTOAQ7RTW8 1153 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 ZNF572Q7Z3I7 529 aaPredicted RBP18.38■□□□□ 0.53
PTCD3-210ENST00000473829 KCNMB4Q86W47 210 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 AMIGO1Q86WK6 493 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 DTX1Q86Y01 620 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 ADGRF3Q8IZF5 1079 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 PDIK1LQ8N165 341 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 RNF31Q96EP0 1072 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 SLC41A2Q96JW4 573 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 CD180Q99467 661 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 SLC30A3Q99726 388 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 DPH5Q9H2P9 285 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 FBXO8Q9NRD0 319 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 IARS2Q9NSE4 1012 aaKnown RBP18.38■□□□□ 0.53
PTCD3-210ENST00000473829 SLC17A6Q9P2U8 582 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 FBXO5Q9UKT4 447 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 TDRKHQ9Y2W6 561 aaKnown RBP18.38■□□□□ 0.53
PTCD3-210ENST00000473829 MED16Q9Y2X0 877 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 NFS1Q9Y697 457 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 TEX264Q9Y6I9 313 aa18.38■□□□□ 0.53
PTCD3-210ENST00000473829 SMAPO00193 183 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 PFDN6O15212 129 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 KCNAB1Q14722 419 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 FASTKD3Q14CZ7 662 aaKnown RBP18.37■□□□□ 0.53
PTCD3-210ENST00000473829 SPANXN3Q5MJ09 141 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 DCAF12Q5T6F0 453 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 ARMC6Q6NXE6 501 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 UNC5AQ6ZN44 842 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 CFAP61Q8NHU2 1237 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 UBXN4Q92575 508 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 CFAP36Q96G28 342 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 ERP44Q9BS26 406 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 FAM167BQ9BTA0 163 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 CIDEBQ9UHD4 219 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 TSR3Q9UJK0 312 aaKnown RBP18.37■□□□□ 0.53
PTCD3-210ENST00000473829 RALYQ9UKM9 306 aaKnown RBP18.37■□□□□ 0.53
PTCD3-210ENST00000473829 LHX6Q9UPM6 363 aa18.37■□□□□ 0.53
PTCD3-210ENST00000473829 GSAPA4D1B5 854 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 IQCJ-SCHIP1C9J366 451 aaPredicted RBP18.36■□□□□ 0.53
PTCD3-210ENST00000473829 H3BMM5 538 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 SNRNP200O75643 2136 aaKnown RBP18.36■□□□□ 0.53
PTCD3-210ENST00000473829 TTC4O95801 387 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 CD82P27701 267 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 ARL4CP56559 192 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 FOXM1Q08050 763 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 PRKAA1Q13131 559 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 GRB7Q14451 532 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 PLEKHS1Q5SXH7 462 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 STEAP4Q687X5 459 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 DUPD1Q68J44 220 aa18.36■□□□□ 0.53
PTCD3-210ENST00000473829 TRMT10BQ6PF06 316 aaKnown RBP18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms