RNA–Protein interactions for RNA: ENST00000471218.5

PTPRE-207, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 3 BASIC

Gene PTPRE, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-207ENST00000471218 FGF4P08620 206 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 RPS17P08708 135 aaKnown RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 PRSS56P0CW18 603 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 MTHFD2P13995 350 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 ADSLP30566 484 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 TRIM23P36406 574 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 WASP42768 502 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 GRK6P43250 576 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 GPR1P46091 355 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 GLRBP48167 497 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 RPL14P50914 215 aaKnown RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 ARFIP2P53365 341 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 NAGLUP54802 743 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 LCP2Q13094 533 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 GTF2H3Q13889 308 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 PTPRRQ15256 657 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 PCBP2Q15366 365 aaKnown RBP eCLIP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 PPP1R3AQ16821 1122 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 TMEM259Q4ZIN3 620 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 LACTB2Q53H82 288 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 ZNF678Q5SXM1 525 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SULT1C3Q6IMI6 304 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SBSNQ6UWP8 590 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 RNF165Q6ZSG1 346 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 CCDC121Q6ZUS5 278 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 TRIM69Q86WT6 500 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 TMPRSS6Q8IU80 811 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SFTPA1Q8IWL2 248 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 FBXO39Q8N4B4 442 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 AADATQ8N5Z0 425 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 ZNF366Q8N895 744 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SIDT2Q8NBJ9 832 aaKnown RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 LSM14AQ8ND56 463 aaKnown RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 FAM174AQ8TBP5 190 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 RHBDD1Q8TEB9 315 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 CCT6BQ92526 530 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SCAMP4Q969E2 229 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 COX14Q96I36 57 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 HIC2Q96JB3 615 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 LENG8Q96PV6 779 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 LRRC37BQ96QE4 947 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SORT1Q99523 831 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 CCM2Q9BSQ5 444 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 BOCQ9BWV1 1114 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 GPR174Q9BXC1 333 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SLC12A9Q9BXP2 914 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 TRIM54Q9BYV2 358 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 MIR1-1HGQ9H1L0 117 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 DPEP2Q9H4A9 486 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 MTG2Q9H4K7 406 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 ACTR5Q9H9F9 607 aaPredicted RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SGK2Q9HBY8 427 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 SAR1AQ9NR31 198 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 TMPRSS11EQ9UL52 423 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 TRIM33Q9UPN9 1127 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 FNDC3AQ9Y2H6 1198 aaKnown RBP8.97□□□□□ -0.97
PTPRE-207ENST00000471218 ASXL3Q9C0F0 2248 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 CABIN1Q9Y6J0 2220 aa8.97□□□□□ -0.97
PTPRE-207ENST00000471218 CEP192Q8TEP8 1941 aa8.96□□□□□ -0.97
PTPRE-207ENST00000471218 PABPN1LA6NDY0 278 aaKnown RBP8.96□□□□□ -0.98
PTPRE-207ENST00000471218 FADS2P1A8MWK0 482 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 C10orf142B7Z368 130 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 GFYI3L273 518 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 VPS4BO75351 444 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 GFAPP14136 432 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 GGT5P36269 586 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 RASSF2P50749 326 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TPMTP51580 245 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 INHBCP55103 352 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 PKNOX1P55347 436 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TAS2R38P59533 333 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TMEM115Q12893 351 aaPredicted RBP8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TGFBIQ15582 683 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 OR4D1Q15615 310 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TSNQ15631 228 aaKnown RBP8.96□□□□□ -0.98
PTPRE-207ENST00000471218 HLA-BQ31612 363 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 ARL13AQ5H913 290 aaPredicted RBP8.96□□□□□ -0.98
PTPRE-207ENST00000471218 SEL1L3Q68CR1 1132 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 ANKS6Q68DC2 871 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 RAET1GQ6H3X3 334 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 FRA10AC1Q70Z53 315 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TMPRSS12Q86WS5 348 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 HORMAD1Q86X24 394 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 CPNE9Q8IYJ1 553 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 OXR1Q8N573 874 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 CLDN19Q8N6F1 224 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 PTGR2Q8N8N7 351 aaPredicted RBP8.96□□□□□ -0.98
PTPRE-207ENST00000471218 HM13Q8TCT9 377 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 EEF1AKMT1Q8WVE0 214 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 ATL1Q8WXF7 558 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 ASB11Q8WXH4 323 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TMEM237Q96Q45 408 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 CCDC28BQ9BUN5 200 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TEX101Q9BY14 249 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 NPHS2Q9NP85 383 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 FBXL12Q9NXK8 326 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 CNOT6Q9ULM6 557 aaKnown RBP8.96□□□□□ -0.98
PTPRE-207ENST00000471218 DNAJC16Q9Y2G8 782 aa8.96□□□□□ -0.98
PTPRE-207ENST00000471218 GOLGA4Q13439 2230 aaKnown RBP8.96□□□□□ -0.98
PTPRE-207ENST00000471218 TNRC6BQ9UPQ9 1833 aaKnown RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms