RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CCDC78A2IDD5 438 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 E7EQ34 232 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 APOC4-APOC2K7ER74 178 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 KCNN4O15554 427 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 CNOT3O75175 753 aaKnown RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 APOC2P02655 101 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 RALBP11234 206 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 ZNF140P52738 457 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 NCF4Q15080 339 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 ZRANB3Q5FWF4 1079 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 CCDC181Q5TID7 509 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 ZNF787Q6DD87 383 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 TAS2R42Q7RTR8 314 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 PIANPQ8IYJ0 282 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 CARFQ8N187 725 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 TAB3Q8N5C8 712 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 TMEM102Q8N9M5 508 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 GLIS1Q8NBF1 620 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 RNF214Q8ND24 703 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 OR5AR1Q8NGP9 310 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 TFGQ92734 400 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 RANBP9Q96S59 729 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 SMAD5Q99717 465 aaKnown RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 TBL1YQ9BQ87 522 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 PITPNM3Q9BZ71 974 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 TFB2MQ9H5Q4 396 aaKnown RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 SPHK1Q9NYA1 384 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 ZDHHC3Q9NYG2 299 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 DHCR7Q9UBM7 475 aaKnown RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 ERRFI1Q9UJM3 462 aaPredicted RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 ICKQ9UPZ9 632 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 HEBP2Q9Y5Z4 205 aa11.87□□□□□ -0.51
HDAC3-204ENST00000469207 SPTBN1Q01082 2364 aaKnown RBP11.87□□□□□ -0.51
HDAC3-204ENST00000469207 CACNA1DQ01668 2161 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 RCCD1A6NED2 376 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 OR51F1A6NGY5 319 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 AKR1B15C9JRZ8 316 aaPredicted RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 H3BMH7 237 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 IFRD1O00458 451 aaPredicted RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 CRTAMO95727 393 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 CLDN1O95832 211 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 TPM1P09493 284 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 RBP3P10745 1247 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 ITGALP20701 1170 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 ACRV1P26436 265 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 GABRA4P48169 554 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 HADHBP55084 474 aaKnown RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 EIF3EP60228 445 aaKnown RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 TBX2Q13207 712 aaPredicted RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 BOP1Q14137 746 aaKnown RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 NR6A1Q15406 480 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 ITPRIPL1Q6GPH6 555 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 DARS2Q6PI48 645 aaKnown RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 UNC5AQ6ZN44 842 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 MED25Q71SY5 747 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 PNPLA2Q96AD5 504 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 ULK4Q96C45 1275 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 SGSM3Q96HU1 749 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 OR2A14Q96R47 310 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 PLAGL1Q9UM63 463 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 CDYLQ9Y232 598 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 KLHL20Q9Y2M5 609 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 AAR2Q9Y312 384 aaKnown RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 PTRH2Q9Y3E5 179 aaKnown RBP11.86□□□□□ -0.51
HDAC3-204ENST00000469207 PCDHGB7Q9Y5F8 929 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 PCDHA13Q9Y5I0 950 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 DUSP10Q9Y6W6 482 aa11.86□□□□□ -0.51
HDAC3-204ENST00000469207 NOTCH2Q04721 2471 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 FER1L5A0AVI2 2057 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 IGLV3-16A0A075B6K0 115 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 TRBV5-4A0A0C4DH59 114 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 C2orf74A8MZ97 194 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 ALOX12BO75342 701 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 CBX6O95503 412 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 PYGMP11217 842 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 UGT2B7P16662 529 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 AGXTP21549 392 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 PRPSAP1Q14558 356 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 SSPNQ14714 243 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 DBN1Q16643 649 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 SPESP1Q6UW49 350 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 ZNF655Q8N720 491 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-204ENST00000469207 TC2NQ8N9U0 490 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 FLVCR1-AS1Q8TAF5 88 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 INPP5DQ92835 1189 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 CDKN2AIPNLQ96HQ2 116 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 ZNF552Q9H707 407 aaPredicted RBP11.85□□□□□ -0.51
HDAC3-204ENST00000469207 MVB12BQ9H7P6 319 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 SYTL2Q9HCH5 934 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 SMARCAL1Q9NZC9 954 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 CIDEBQ9UHD4 219 aa11.85□□□□□ -0.51
HDAC3-204ENST00000469207 TDRKHQ9Y2W6 561 aaKnown RBP11.85□□□□□ -0.51
HDAC3-204ENST00000469207 MDC1Q14676 2089 aaKnown RBP11.85□□□□□ -0.51
HDAC3-204ENST00000469207 KLHL33A6NCF5 533 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 CFAP99D6REC4 459 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 MATN2O00339 956 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 OR2B3O76000 313 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 METTL18O95568 372 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 MSL3P1P0C860 447 aa11.84□□□□□ -0.51
HDAC3-204ENST00000469207 CTNNA2P26232 953 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms