RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 MCUQ8NE86 351 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 LRTOMTQ8WZ04 291 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 ATP6V1E2Q96A05 226 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 RPL10LQ96L21 214 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 FCRL2Q96LA5 508 aaPredicted RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 ZNF597Q96LX8 424 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 ACTR6Q9GZN1 396 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 SLC6A15Q9H2J7 730 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 ZNF556Q9HAH1 456 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 RGS18Q9NS28 235 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 GMPR2Q9P2T1 348 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 EIF3KQ9UBQ5 218 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 TMPRSS11EQ9UL52 423 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 SCML1Q9UN30 329 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 DERAQ9Y315 318 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 SAC3D1A6NKF1 404 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 WWP2O00308 870 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 TFECO14948 347 aaPredicted RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 ATP8B3O60423 1300 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 MT-ND3P03897 115 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 KCNE1P15382 129 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 SSTR1P30872 391 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 HTR3AP46098 478 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 RPS24P62847 133 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 TEKQ02763 1124 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 FASTKD3Q14CZ7 662 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 C9orf50Q5SZB4 431 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 SHQ1Q6PI26 577 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 EFL1Q7Z2Z2 1120 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 KIF18BQ86Y91 864 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 TRPV3Q8NET8 790 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 AGR3Q8TD06 166 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 SLC35F5Q8WV83 523 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 PCNPQ8WW12 178 aaKnown RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 CSF3RQ99062 836 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 ANKRD60Q9BZ19 345 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 RANGRFQ9HD47 186 aaPredicted RBP9.78□□□□□ -0.84
NUP50-214ENST00000469163 ACSS2Q9NR19 701 aa9.78□□□□□ -0.84
NUP50-214ENST00000469163 NUP205Q92621 2012 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 RNF103-CHMP3A0A140T963 221 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 PSTPIP1O43586 416 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 PFKMP08237 780 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 ERCC2P18074 760 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 TNNI3P19429 210 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 AOC1P19801 751 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 PSMA3P25788 255 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 OR1E1P30953 314 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 CCR10P46092 362 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 PGGT1BP53609 377 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 RPP30P78346 268 aaKnown RBP9.77□□□□□ -0.84
NUP50-214ENST00000469163 BST1Q10588 318 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 ZDHHC17Q8IUH5 632 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 CCDC116Q8IYX3 515 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 TOP6BLQ8N6T0 577 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 ATG16L2Q8NAA4 619 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 OR7A2PQ8NGA2 310 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 OR52N1Q8NH53 320 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 ALKBH8Q96BT7 664 aaKnown RBP9.77□□□□□ -0.84
NUP50-214ENST00000469163 NXNL1Q96CM4 212 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 SLC13A1Q9BZW2 595 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.77□□□□□ -0.84
NUP50-214ENST00000469163 RHBGQ9H310 441 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 SLC28A3Q9HAS3 691 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 ZNF275Q9NSD4 429 aaPredicted RBP9.77□□□□□ -0.84
NUP50-214ENST00000469163 STOML2Q9UJZ1 356 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 PLCL2Q9UPR0 1127 aa9.77□□□□□ -0.84
NUP50-214ENST00000469163 UPK1BO75841 260 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 GJB5O95377 273 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 CDK1P06493 297 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 RAB3AP20336 220 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 PBX2P40425 430 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 PPP5CP53041 499 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 SMAD3P84022 425 aaKnown RBP9.77□□□□□ -0.85
NUP50-214ENST00000469163 GRIK2Q13002 908 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 STX5Q13190 355 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 DGUOKQ16854 277 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 MPP7Q5T2T1 576 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 UNC93AQ86WB7 457 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 TMEM126BQ8IUX1 230 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 PHTF2Q8N3S3 785 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 PIK3C3Q8NEB9 887 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 ASZ1Q8WWH4 475 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 EXT2Q93063 718 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 SGTBQ96EQ0 304 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 ST6GAL2Q96JF0 529 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 RIPOR3Q96MK2 946 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 ZNF578Q96N58 590 aaPredicted RBP9.77□□□□□ -0.85
NUP50-214ENST00000469163 PHOX2BQ99453 314 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 CIPCQ9C0C6 399 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 NOL11Q9H8H0 719 aaKnown RBP9.77□□□□□ -0.85
NUP50-214ENST00000469163 RP1L1Q8IWN7 2480 aaPredicted RBP9.77□□□□□ -0.85
NUP50-214ENST00000469163 PLXNB2O15031 1838 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 C2orf78A6NCI8 922 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 C2CD4BA6NLJ0 364 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 HIDE1A8MVS5 230 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 CHURC1-FNTBB4DL54 471 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 H0Y626 953 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 XYLBO75191 536 aa9.77□□□□□ -0.85
NUP50-214ENST00000469163 ZNF806P0C7X5 589 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms