RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-205ENST00000466897 EME2A4GXA9 379 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-205ENST00000466897 DUSP3P51452 185 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-205ENST00000466897 ATP6V0D1P61421 351 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 HHEXQ03014 270 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 KRT71Q3SY84 523 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 TBC1D1Q86TI0 1168 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-205ENST00000466897 DCUN1D3Q8IWE4 304 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 MAGEC3Q8TD91 643 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 ANKRD49Q8WVL7 239 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 PATE1Q8WXA2 126 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 NAT6Q93015 286 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 PGM2Q96G03 612 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 CDC6Q99741 560 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 TRIT1Q9H3H1 467 aaKnown RBP14.81□□□□□ -0.04
NPHP4-205ENST00000466897 KIR3DX1Q9H7L2 352 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 SLC40A1Q9NP59 571 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 IMP3Q9NV31 184 aaKnown RBP14.81□□□□□ -0.04
NPHP4-205ENST00000466897 SIRPGQ9P1W8 387 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 TBK1Q9UHD2 729 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 NOVA2Q9UNW9 492 aaKnown RBP14.81□□□□□ -0.04
NPHP4-205ENST00000466897 ASF1AQ9Y294 204 aa14.81□□□□□ -0.04
NPHP4-205ENST00000466897 TLDC2A0PJX2 215 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 SMIM23A6NLE4 172 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 KDM1AO60341 852 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 C1orf105O95561 183 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 LDOC1O95751 146 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 VIPP01282 170 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 CATP04040 527 aaKnown RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 ENO2P09104 434 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 LTA4HP09960 611 aaKnown RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 CCDC166P0CW27 439 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 KRT15P19012 456 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 GPR3P46089 330 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 PGGT1BP53609 377 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 MAZP56270 477 aaKnown RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 FAM83EQ2M2I3 478 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 TNFAIP8L3Q5GJ75 292 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 CEP85LQ5SZL2 805 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 SH2D5Q6ZV89 423 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 PIWIL4Q7Z3Z4 852 aaKnown RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 GLRX5Q86SX6 157 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 CLEC14AQ86T13 490 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 SFTPA2Q8IWL1 248 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 TRIM48Q8IWZ4 208 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 CENPLQ8N0S6 344 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 CYP4X1Q8N118 509 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 RHBDD1Q8TEB9 315 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 SETD7Q8WTS6 366 aaKnown RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 SKA2Q8WVK7 121 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 RUFY1Q96T51 708 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 SLC12A9Q9BXP2 914 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.8□□□□□ -0.04
NPHP4-205ENST00000466897 NMRAL1Q9HBL8 299 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 SENP1Q9P0U3 644 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 FTSJ1Q9UET6 329 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 PADI4Q9UM07 663 aa14.8□□□□□ -0.04
NPHP4-205ENST00000466897 LILRA5A6NI73 299 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 PCNX2A6NKB5 2137 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 MAP2K7O14733 419 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 SH3BP5O60239 455 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 KLHL2O95198 593 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 MT-ND3P03897 115 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 GP1BAP07359 652 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 GSTA1P08263 222 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 CD1DP15813 335 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 CKMT2P17540 419 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 CSRP1P21291 193 aaKnown RBP14.79□□□□□ -0.04
NPHP4-205ENST00000466897 ACP1P24666 158 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 EPHA4P54764 986 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 ABRQ12979 859 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 TSNAXIP1Q2TAA8 658 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 TTC23LQ6PF05 361 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 SBSNQ6UWP8 590 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 TMEM26Q6ZUK4 368 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 ADAMTSL2Q86TH1 951 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 TRABD2AQ86V40 505 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 KIAA2013Q8IYS2 634 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 KIAA1191Q96A73 305 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 RAD51AP1Q96B01 352 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 CNDP2Q96KP4 475 aaKnown RBP14.79□□□□□ -0.04
NPHP4-205ENST00000466897 EPB41L1Q9H4G0 881 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 TFB2MQ9H5Q4 396 aaKnown RBP14.79□□□□□ -0.04
NPHP4-205ENST00000466897 IGSF5Q9NSI5 407 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 MKS1Q9NXB0 559 aa14.79□□□□□ -0.04
NPHP4-205ENST00000466897 CFAP20Q9Y6A4 193 aaKnown RBP14.79□□□□□ -0.04
NPHP4-205ENST00000466897 RP1P56715 2156 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 PCM1Q15154 2024 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 FAM221BA6H8Z2 402 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 ARHGEF33A8MVX0 844 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 MYO1CO00159 1063 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 SLC30A4O14863 429 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 TM4SF5O14894 197 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 PPM1DO15297 605 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 RGS16O15492 202 aaPredicted RBP14.78□□□□□ -0.04
NPHP4-205ENST00000466897 ZW10O43264 779 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 TNFSF14O43557 240 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 ZBTB14O43829 449 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 CYP2A7P20853 494 aa14.78□□□□□ -0.04
NPHP4-205ENST00000466897 SDHBP21912 280 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms