RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 SIDT2Q8NBJ9 832 aaKnown RBP14.96□□□□□ -0.01
VARS-219ENST00000461328 LKAAEAR1Q8TD35 194 aa14.96□□□□□ -0.01
VARS-219ENST00000461328 EXTL1Q92935 676 aa14.96□□□□□ -0.01
VARS-219ENST00000461328 RNF31Q96EP0 1072 aa14.96□□□□□ -0.01
VARS-219ENST00000461328 MED8Q96G25 268 aa14.96□□□□□ -0.01
VARS-219ENST00000461328 RUNDC3BQ96NL0 473 aa14.96□□□□□ -0.01
VARS-219ENST00000461328 PANX3Q96QZ0 392 aa14.96□□□□□ -0.01
VARS-219ENST00000461328 MAP3K3Q99759 626 aa14.96□□□□□ -0.01
VARS-219ENST00000461328 RPS6KL1Q9Y6S9 549 aa14.96□□□□□ -0.01
VARS-219ENST00000461328 IQCF5A8MTL0 148 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 DLGAP3O95886 979 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 ARNTP27540 789 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 DR1Q01658 176 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 ABHD18Q0P651 414 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 THOC5Q13769 683 aaKnown RBP14.95□□□□□ -0.02
VARS-219ENST00000461328 RNASEH2BQ5TBB1 312 aaKnown RBP14.95□□□□□ -0.02
VARS-219ENST00000461328 IZUMO3Q5VZ72 239 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 PCGF5Q86SE9 256 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 PPP1R3BQ86XI6 285 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 KMT5CQ86Y97 462 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 CREG2Q8IUH2 290 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 UNC5BQ8IZJ1 945 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 C17orf53Q8N3J3 647 aaPredicted RBP14.95□□□□□ -0.02
VARS-219ENST00000461328 ESX1Q8N693 406 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 NAT8LQ8N9F0 302 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 OR52E1Q8NGJ3 308 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 OR5AR1Q8NGP9 310 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 SKA2Q8WVK7 121 aaPredicted RBP14.95□□□□□ -0.02
VARS-219ENST00000461328 TRIM56Q9BRZ2 755 aaKnown RBP14.95□□□□□ -0.02
VARS-219ENST00000461328 EFHD1Q9BUP0 239 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 CARD6Q9BX69 1037 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 SEMA4CQ9C0C4 833 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 PDE7BQ9NP56 450 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 SOHLH2Q9NX45 425 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 IL1RAPL1Q9NZN1 696 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 PCYOX1Q9UHG3 505 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 TDRKHQ9Y2W6 561 aaKnown RBP14.95□□□□□ -0.02
VARS-219ENST00000461328 KALRNO60229 2985 aa14.95□□□□□ -0.02
VARS-219ENST00000461328 LOC101059948A0A1B0GTJ6 334 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 FAM237BA0A1B0GVD1 139 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 SLC5A10A0PJK1 596 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 MAGEB16A2A368 324 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 ZNF891A8MT65 544 aaPredicted RBP14.94□□□□□ -0.02
VARS-219ENST00000461328 MATN2O00339 956 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 DNALI1O14645 258 aaPredicted RBP14.94□□□□□ -0.02
VARS-219ENST00000461328 KDM1AO60341 852 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 FGF5P12034 268 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 ZNF28P17035 718 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 OGNP20774 298 aaKnown RBP14.94□□□□□ -0.02
VARS-219ENST00000461328 CDH3P22223 829 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 CCR7P32248 378 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 KPNA2P52292 529 aaKnown RBP14.94□□□□□ -0.02
VARS-219ENST00000461328 TUBB3Q13509 450 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 MAP7Q14244 749 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 KCNAB1Q14722 419 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 TBR1Q16650 682 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 LINC00303Q3SY05 128 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 ANKRD20A4Q4UJ75 823 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 DNAJC21Q5F1R6 531 aaKnown RBP14.94□□□□□ -0.02
VARS-219ENST00000461328 ZNF470Q6ECI4 717 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 NEPROQ6NW34 567 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 HOOK3Q86VS8 718 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 AMIGO1Q86WK6 493 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 TBC1D21Q8IYX1 336 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 CFAP61Q8NHU2 1237 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 ASZ1Q8WWH4 475 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 SLCO2A1Q92959 643 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 STAMBPL1Q96FJ0 436 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 SLC41A2Q96JW4 573 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 SLC12A9Q9BXP2 914 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 XKR8Q9H6D3 395 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 SEMA5BQ9P283 1151 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 LNPEPQ9UIQ6 1025 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 RARRES3Q9UL19 164 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 VPS9D1Q9Y2B5 631 aa14.94□□□□□ -0.02
VARS-219ENST00000461328 BHMG1C9JSJ3 638 aaPredicted RBP14.93□□□□□ -0.02
VARS-219ENST00000461328 CCDC188H7C350 402 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 BTN3A1O00481 513 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 SPAG6O75602 509 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 KIAA0754O94854 1291 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 RPN2P04844 631 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 EBLN1P0CF75 366 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 FOLR1P15328 257 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 RPS3P23396 243 aaKnown RBP eCLIP14.93□□□□□ -0.021e-13■■□□□ 12
VARS-219ENST00000461328 CASQ1P31415 396 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 FMO4P31512 558 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 SHMT2P34897 504 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 STAT5AP42229 794 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 HSD11B2P80365 405 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 ACY1Q03154 408 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 TYSND1Q2T9J0 566 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.93□□□□□ -0.02
VARS-219ENST00000461328 TMTC4Q5T4D3 741 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 C6orf15Q6UXA7 325 aaPredicted RBP14.93□□□□□ -0.02
VARS-219ENST00000461328 SYDE1Q6ZW31 735 aaPredicted RBP14.93□□□□□ -0.02
VARS-219ENST00000461328 OTOAQ7RTW8 1153 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 SLC22A15Q8IZD6 547 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 GALNT6Q8NCL4 622 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 LPGAT1Q92604 370 aa14.93□□□□□ -0.02
VARS-219ENST00000461328 FAM136AQ96C01 138 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms