RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 PIGUQ9H490 435 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CSNK1G1Q9HCP0 422 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 GKN1Q9NS71 199 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MED9Q9NWA0 146 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MARCH5Q9NX47 278 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 KCNK4Q9NYG8 393 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MTRRQ9UBK8 725 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 KLQ9UEF7 1012 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 VPS28Q9UK41 221 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PCDHGB4Q9UN71 923 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PCDHB7Q9Y5E2 793 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SNX13Q9Y5W8 968 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ACTL7AQ9Y615 435 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 COPG1Q9Y678 874 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 A3GALT2U3KPV4 340 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MYBPHLA2RUH7 354 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 RAB19A4D1S5 217 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 HHLA1C9JL84 531 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 F8VP50 259 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 AIM2O14862 343 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 KLF11O14901 512 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 FSCN2O14926 492 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 HRO43593 1189 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 LILRB5O75023 590 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 NDUFS6O75380 124 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 LRCH4O75427 683 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PRKD3O94806 890 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TIMP1P01033 207 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 FGGP02679 453 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ABHD2P08910 425 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 IL7P13232 177 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PRF1P14222 555 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 AOC1P19801 751 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 DDCP20711 480 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ADORA2BP29275 332 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CLCN5P51795 746 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZNF143P52747 638 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 WDR4P57081 412 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SLC6A3Q01959 620 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CHAF1BQ13112 559 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MPP2Q14168 576 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MRPL58Q14197 206 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PTPRRQ15256 657 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ANGPT1Q15389 498 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TAZQ16635 292 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CA9Q16790 459 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MDH1BQ5I0G3 518 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 FAM102AQ5T9C2 384 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SEL1L2Q5TEA6 688 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 FAM171A1Q5VUB5 890 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 LPCAT4Q643R3 524 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 OVOS1Q6IE37 1185 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TYW3Q6IPR3 259 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 LIN54Q6MZP7 749 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZDHHC24Q6UX98 284 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 NECAB2Q7Z6G3 386 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TAC4Q86UU9 113 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PIGZQ86VD9 579 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SLC22A16Q86VW1 577 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZNF227Q86WZ6 799 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 METTL23Q86XA0 190 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SLC13A5Q86YT5 568 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZDHHC13Q8IUH4 622 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 UBQLNLQ8IYU4 475 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZDHHC14Q8IZN3 488 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SCML4Q8N228 414 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 DEPDC4Q8N2C3 294 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PYROXD2Q8N2H3 581 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZCCHC7Q8N3Z6 543 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TXNDC5Q8NBS9 432 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZMIZ2Q8NF64 920 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 OR13F1Q8NGS4 319 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CLHC1Q8NHS4 586 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PHF10Q8WUB8 498 aaKnown RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SNAPC3Q92966 411 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CCDC120Q96HB5 630 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PCED1BQ96HM7 432 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ST6GAL2Q96JF0 529 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PPP1R2P1Q96PQ5 205 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 OR5M11Q96RB7 305 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 SMOQ99835 787 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TCEAL7Q9BRU2 100 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 DCUN1D5Q9BTE7 237 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZYG11BQ9C0D3 744 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 RACGAP1Q9H0H5 632 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 OR51V1Q9H2C8 321 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TNKS2Q9H2K2 1166 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TRPV4Q9HBA0 871 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 KCNK9Q9NPC2 374 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ARHGEF4Q9NR80 690 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 GSN-AS1Q9NRJ2 163 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 ZNF275Q9NSD4 429 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 PLCXD1Q9NUJ7 323 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TMEM39AQ9NV64 488 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 TMEM30AQ9NV96 361 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 UXTQ9UBK9 157 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 BTNL2Q9UIR0 455 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 MBD1Q9UIS9 605 aaPredicted RBP6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 CDC14AQ9UNH5 594 aa6.72□□□□□ -1.33
CUBNP3-201ENST00000457461 LIPT1Q9Y234 373 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms