RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 OR5K2Q8NHB8 316 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 ASZ1Q8WWH4 475 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 PBKQ96KB5 322 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 LHX9Q9NQ69 397 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 KCND1Q9NSA2 647 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 STARD5Q9NSY2 213 aa17.34■□□□□ 0.37
MSH6-207ENST00000456246 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP17.33■□□□□ 0.36
MSH6-207ENST00000456246 PRMT5O14744 637 aaPredicted RBP17.33■□□□□ 0.36
MSH6-207ENST00000456246 TERTO14746 1132 aaKnown RBP17.33■□□□□ 0.36
MSH6-207ENST00000456246 NKX2-8O15522 239 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 OR1I1O60431 355 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 SCRG1O75711 98 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 RPN2P04844 631 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 PRKAR1AP10644 381 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 PRDX3P30048 256 aaKnown RBP17.33■□□□□ 0.36
MSH6-207ENST00000456246 CXCR5P32302 372 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 KCNJ1P48048 391 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 POLE2P56282 527 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 DNASE1L3Q13609 305 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 TMED2Q15363 201 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 DNAJC21Q5F1R6 531 aaKnown RBP17.33■□□□□ 0.36
MSH6-207ENST00000456246 LRRC8BQ6P9F7 803 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 MICALCLQ6ZW33 695 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 HOOK3Q86VS8 718 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 LRRC6Q86X45 466 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 TMEM126BQ8IUX1 230 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 PRELID2Q8N945 189 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 ZNF501Q96CX3 271 aaPredicted RBP17.33■□□□□ 0.36
MSH6-207ENST00000456246 LRFN5Q96NI6 719 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 PANX3Q96QZ0 392 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 CARD6Q9BX69 1037 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 CHRAC1Q9NRG0 131 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 TREX1Q9NSU2 369 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 OR6C2Q9NZP2 312 aa17.33■□□□□ 0.36
MSH6-207ENST00000456246 HEMK1Q9Y5R4 338 aaPredicted RBP17.33■□□□□ 0.36
MSH6-207ENST00000456246 PIPSLA2A3N6 862 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 SLC9B1P1A6NJY1 282 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 BTN3A3O00478 584 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 PFDN6O15212 129 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 CD3EAPO15446 510 aaKnown RBP17.32■□□□□ 0.36
MSH6-207ENST00000456246 TIAF1O95411 115 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 APOA4P06727 396 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 NFATC3Q12968 1075 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 PRKG2Q13237 762 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 KCNAB2Q13303 367 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 SLC22A15Q8IZD6 547 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 ADGRF3Q8IZF5 1079 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 RASGEF1CQ8N431 466 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 OR5AR1Q8NGP9 310 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 APOBEC4Q8WW27 367 aaKnown RBP17.32■□□□□ 0.36
MSH6-207ENST00000456246 KIFC1Q9BW19 673 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 GPR87Q9BY21 358 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 SLC25A18Q9H1K4 315 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 ACTR10Q9NZ32 417 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 GNPTGQ9UJJ9 305 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 TTC7AQ9ULT0 858 aaPredicted RBP17.32■□□□□ 0.36
MSH6-207ENST00000456246 ICKQ9UPZ9 632 aa17.32■□□□□ 0.36
MSH6-207ENST00000456246 BHMG1C9JSJ3 638 aaPredicted RBP17.31■□□□□ 0.36
MSH6-207ENST00000456246 KPNA5O15131 536 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 ZSCAN12O43309 604 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 KLK3P07288 261 aaPredicted RBP17.31■□□□□ 0.36
MSH6-207ENST00000456246 ITGB6P18564 788 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 OAS2P29728 719 aaKnown RBP17.31■□□□□ 0.36
MSH6-207ENST00000456246 CCR7P32248 378 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 MAGEA6P43360 314 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 SEMA3AQ14563 771 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 BRD3Q15059 726 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 GPR19Q15760 415 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 RNF187Q5TA31 235 aaPredicted RBP17.31■□□□□ 0.36
MSH6-207ENST00000456246 MRNIPQ6NTE8 343 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 SPESP1Q6UW49 350 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 CPT1BQ92523 772 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 AP1M1Q9BXS5 423 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 CHRNA10Q9GZZ6 450 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 MRFAP1Q9Y605 127 aa17.31■□□□□ 0.36
MSH6-207ENST00000456246 J3QKU1 62 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 KATNA1O75449 491 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 GPC4O75487 556 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 NDUFS3O75489 264 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 NTRK1P04629 796 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 ST6GAL1P15907 406 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 PAMP19021 973 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 RPS3P23396 243 aaKnown RBP eCLIP17.3■□□□□ 0.368e-8■■■□□ 16.4
MSH6-207ENST00000456246 F8A1P23610 371 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 RPS15P62841 145 aaKnown RBP17.3■□□□□ 0.36
MSH6-207ENST00000456246 CRADDP78560 199 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 HSPA14Q0VDF9 509 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 PTRHD1Q6GMV3 140 aaKnown RBP17.3■□□□□ 0.36
MSH6-207ENST00000456246 C16orf46Q6P387 395 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 FBXO38Q6PIJ6 1188 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 UNC5DQ6UXZ4 953 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 UNC5AQ6ZN44 842 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 SDCCAG8Q86SQ7 713 aaPredicted RBP17.3■□□□□ 0.36
MSH6-207ENST00000456246 GSDMBQ8TAX9 411 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 CT55Q8WUE5 264 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 MAGOHBQ96A72 148 aaKnown RBP17.3■□□□□ 0.36
MSH6-207ENST00000456246 PPM1MQ96MI6 270 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 TRAPPC9Q96Q05 1148 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 XKR8Q9H6D3 395 aa17.3■□□□□ 0.36
MSH6-207ENST00000456246 GRPEL1Q9HAV7 217 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms