RNA–Protein interactions for RNA: ENST00000452520.1

HMGB1P26-201, Transcript of high mobility group box 1 pseudogene 26, humanhuman

BASIC

Gene HMGB1P26, Length 628 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P26-201ENST00000452520 SMARCAL1Q9NZC9 954 aa4.88□□□□□ -1.63
HMGB1P26-201ENST00000452520 STK39Q9UEW8 545 aa4.88□□□□□ -1.63
HMGB1P26-201ENST00000452520 BLOC1S6Q9UL45 172 aa4.88□□□□□ -1.63
HMGB1P26-201ENST00000452520 FAM90A26D6RGX4 464 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 HS3ST1O14792 307 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 SLC30A4O14863 429 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 ST8SIA3O43173 380 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 PLPP2O43688 288 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 PRPSAP2O60256 369 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 PRAMEF11O60813 436 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 VIMP08670 466 aaKnown RBP4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 UROSP10746 265 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 NMBRP28336 390 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 CDC25CP30307 473 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 NME5P56597 212 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 ARF5P84085 180 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 KIF5AQ12840 1032 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 HSPB3Q12988 150 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 SF3B4Q15427 424 aaKnown RBP eCLIP4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 MYLK3Q32MK0 819 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 CCNI2Q6ZMN8 369 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 C11orf57Q6ZUT1 292 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 KCTD9Q7L273 389 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 TMEM173Q86WV6 379 aaPredicted RBP4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 ADHFE1Q8IWW8 467 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 TIGD4Q8IY51 512 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 RTL3Q8N8U3 475 aaKnown RBP4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 DBF4BQ8NFT6 615 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 OR7G3Q8NG95 312 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 OR5R1Q8NH85 324 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 SPATA22Q8NHS9 363 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 OCC1Q8TAD7 63 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 WDR20Q8TBZ3 569 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 DNASE1L2Q92874 299 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 PCYT2Q99447 389 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 TRIM7Q9C029 511 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 C1orf21Q9H246 121 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 HIPK2Q9H2X6 1198 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 GAREM1Q9H706 876 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 TMEM206Q9H813 350 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 FETUBQ9UGM5 382 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 DBNLQ9UJU6 430 aaKnown RBP4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 FBXL2Q9UKC9 423 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 APPL1Q9UKG1 709 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 ITGA11Q9UKX5 1188 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 PADI3Q9ULW8 664 aa4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 PDS5AQ29RF7 1337 aaKnown RBP4.87□□□□□ -1.63
HMGB1P26-201ENST00000452520 LACTBL1A8MY62 500 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 PROB1E7EW31 1015 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 EIF3DO15371 548 aaKnown RBP eCLIP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 ZBTB43O43298 467 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 TXNL1O43396 289 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 VEGFDO43915 354 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 PMS2P2O95744 297 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 GUCA1CO95843 209 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 LINC00271P0C7V0 271 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 TYMPP19971 482 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 S1PR1P21453 382 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 NR2F2P24468 414 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 CORO1AP31146 461 aaKnown RBP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 SNU13P55769 128 aaKnown RBP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 TEFQ10587 303 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 TMEM182Q6ZP80 229 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 CREB3L2Q70SY1 520 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 FAM219AQ8IW50 185 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 UXS1Q8NBZ7 420 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 ACVR1CQ8NER5 493 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 NUDCD2Q8WVJ2 157 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 ABTB1Q969K4 478 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 ST6GALNAC6Q969X2 333 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 RTP4Q96DX8 246 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 MED30Q96HR3 178 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 THOC3Q96J01 351 aaKnown RBP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 MARK4Q96L34 752 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 LRRC3BQ96PB8 259 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 TM6SF1Q9BZW5 370 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 TMEM30AQ9NV96 361 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 DNAJC17Q9NVM6 304 aaKnown RBP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 INTS10Q9NVR2 710 aaKnown RBP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 ANO10Q9NW15 660 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 IL19Q9UHD0 177 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 SIX4Q9UIU6 781 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 SNX7Q9UNH6 387 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 ATP6V0A2Q9Y487 856 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 SPAG9O60271 1321 aaKnown RBP4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 PRAG1Q86YV5 1406 aa4.86□□□□□ -1.63
HMGB1P26-201ENST00000452520 ANKRD28O15084 1053 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 SLC28A2O43868 658 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 ZBTB11O95625 1053 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 RLN1P04808 185 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 T-ENOLP0DO92 83 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 GNAZP19086 355 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 GABRA5P31644 462 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 KHKP50053 298 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 CLDN20P56880 219 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 ST8SIA6P61647 398 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 ZXDBP98169 803 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 RPS6KA1Q15418 735 aa4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 TWISTNBQ3B726 338 aaPredicted RBP4.85□□□□□ -1.63
HMGB1P26-201ENST00000452520 ETFRF1Q6IPR1 90 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms