RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 DDX5P17844 614 aaKnown RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ITGA3P26006 1051 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 GSTM2P28161 218 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 HOXD9P28356 352 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 GJC1P36383 396 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 HTR6P50406 440 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TOB1P50616 345 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF75DP51815 510 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 DGKQP52824 942 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TUBA1BP68363 451 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 IRX1P78414 480 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 PDE1BQ01064 536 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TIAL1Q01085 375 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 HSF2Q03933 536 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 FOLH1Q04609 750 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TP53BP2Q13625 1128 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 NCF4Q15080 339 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 SSX2Q16385 188 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 AANATQ16613 207 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 HSP90AA4PQ58FG1 418 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 PLAC9Q5JTB6 97 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 LRRC38Q5VT99 294 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TXNRD3NBQ6F5E7 133 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TEX38Q6PEX7 206 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TMEM108Q6UXF1 575 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TUBA1AQ71U36 451 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 CXXC5Q7LFL8 322 aaKnown RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRMT11Q7Z4G4 463 aaKnown RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 CLEC14AQ86T13 490 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 AQP12AQ8IXF9 295 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 HACE1Q8IYU2 909 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 OFCC1Q8IZS5 231 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 BCL6BQ8N143 479 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 RNF10Q8N5U6 811 aaKnown RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 COMMD1Q8N668 190 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 METTL25Q8N6Q8 603 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 RNF148Q8N7C7 305 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 DNAAF3Q8N9W5 541 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 BEND2Q8NDZ0 799 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 STKLD1Q8NE28 680 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 CMASQ8NFW8 434 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 CAVIN3Q969G5 261 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 RFKQ969G6 155 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ESAMQ96AP7 390 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 SGK3Q96BR1 496 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ULK4Q96C45 1275 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 DAZAP1Q96EP5 407 aaKnown RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM71F1Q96KD3 344 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 BBS4Q96RK4 519 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 CITED1Q99966 193 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 PTDSS2Q9BVG9 487 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 NUP58Q9BVL2 599 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 NUF2Q9BZD4 464 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 EGLN1Q9GZT9 426 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 KCNK15Q9H427 330 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 AZI2Q9H6S1 392 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ACTR8Q9H981 624 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 KCNMB3Q9NPA1 279 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ENTPD7Q9NQZ7 604 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 KLHL28Q9NXS3 571 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ETAA1Q9NY74 926 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLCO1C1Q9NYB5 712 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 DBF4Q9UBU7 674 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 Q9UFV3 132 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 CDC42EP3Q9UKI2 254 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 NDRG4Q9ULP0 352 aaKnown RBP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 SORCS3Q9UPU3 1222 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 ENTPD4Q9Y227 616 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 PRELID1Q9Y255 219 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 FAM96BQ9Y3D0 163 aa4.33□□□□□ -1.72
HMGB3P21-201ENST00000452483 CYP3A7-CYP3A51PA0A087WV96 503 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 A0A1W2PPM1 405 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ANKDD1BA6NHY2 528 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 OR52A4PA6NMU1 304 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 C4orf47A7E2U8 309 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 A8MUI8 341 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 BECN2A8MW95 431 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 AHRRA9YTQ3 701 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 H0YHG0 523 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 H3BMM5 538 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 TRIM77I1YAP6 450 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ANKRD28O15084 1053 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SEC14L5O43304 696 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 AKR7A2O43488 359 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ATP9AO75110 1047 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ATG13O75143 517 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 RAD51DO75771 328 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 KDM4BO94953 1096 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 ADAP00813 363 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 TFP02787 698 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 HIST1H2ABP04908 130 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 HMBSP08397 361 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 HOXB5P09067 269 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 PABPC4LP0CB38 370 aaKnown RBP4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 SLC2A4P14672 509 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 CEBPBP17676 345 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 HIST1H2ADP20671 130 aa4.32□□□□□ -1.72
HMGB3P21-201ENST00000452483 EDN2P20800 178 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms