RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 FASTKD1Q53R41 847 aaKnown RBP18.81■□□□□ 0.6
USP40-207ENST00000450940 FBXO38Q6PIJ6 1188 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 ZNF517Q6ZMY9 492 aaPredicted RBP18.81■□□□□ 0.6
USP40-207ENST00000450940 GSTA5Q7RTV2 222 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 RASGEF1CQ8N431 466 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 OR5AR1Q8NGP9 310 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 RNF31Q96EP0 1072 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 HGH1Q9BTY7 390 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 CARD6Q9BX69 1037 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 POLG2Q9UHN1 485 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 ICKQ9UPZ9 632 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 MRPS18BQ9Y676 258 aaKnown RBP18.81■□□□□ 0.6
USP40-207ENST00000450940 TENM4Q6N022 2769 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 BSNQ9UPA5 3926 aa18.81■□□□□ 0.6
USP40-207ENST00000450940 C2orf74A8MZ97 194 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 C21orf140B9A014 251 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 GPC4O75487 556 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 PRKAR1AP10644 381 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 CCR7P32248 378 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 MAGEA6P43360 314 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 POLE2P56282 527 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 SESN2P58004 480 aaPredicted RBP18.8■□□□□ 0.6
USP40-207ENST00000450940 BASP1P80723 227 aaKnown RBP18.8■□□□□ 0.6
USP40-207ENST00000450940 AARS2Q5JTZ9 985 aaKnown RBP18.8■□□□□ 0.6
USP40-207ENST00000450940 SLC22A15Q8IZD6 547 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 OR5K2Q8NHB8 316 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 LRFN5Q96NI6 719 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 TRAPPC9Q96Q05 1148 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 KIFC1Q9BW19 673 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 SLC25A18Q9H1K4 315 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 AKIRIN1Q9H9L7 192 aaPredicted RBP18.8■□□□□ 0.6
USP40-207ENST00000450940 CATSPERZQ9NTU4 200 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 BFARQ9NZS9 450 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 MARCH4Q9P2E8 410 aaPredicted RBP18.8■□□□□ 0.6
USP40-207ENST00000450940 CDYLQ9Y232 598 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 ASF1AQ9Y294 204 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 PCDHB3Q9Y5E6 796 aa18.8■□□□□ 0.6
USP40-207ENST00000450940 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP18.79■□□□□ 0.6
USP40-207ENST00000450940 GSAPA4D1B5 854 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 CD3EAPO15446 510 aaKnown RBP18.79■□□□□ 0.6
USP40-207ENST00000450940 CPNE3O75131 537 aaKnown RBP18.79■□□□□ 0.6
USP40-207ENST00000450940 NTRK1P04629 796 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 ATXN8OSP0DMR3 200 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 ST6GAL1P15907 406 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 SHMT2P34897 504 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 TTPAP49638 278 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 CRADDP78560 199 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 NFATC3Q12968 1075 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 DNASE1L3Q13609 305 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 BRD3Q15059 726 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 ARMC3Q5W041 872 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 LRRC8BQ6P9F7 803 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 NAPRTQ6XQN6 538 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 UNC5AQ6ZN44 842 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 MPP5Q8N3R9 675 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 CT55Q8WUE5 264 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 AP1M1Q9BXS5 423 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 GPR87Q9BY21 358 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 FAM117AQ9C073 453 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 CHRNA10Q9GZZ6 450 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 XKR8Q9H6D3 395 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 MRM3Q9HC36 420 aaKnown RBP18.79■□□□□ 0.6
USP40-207ENST00000450940 SOHLH2Q9NX45 425 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 ACTR10Q9NZ32 417 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 ANAPC5Q9UJX4 755 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 TTC7AQ9ULT0 858 aaPredicted RBP18.79■□□□□ 0.6
USP40-207ENST00000450940 JRKLQ9Y4A0 524 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 SEC16AO15027 2179 aa18.79■□□□□ 0.6
USP40-207ENST00000450940 SNRNP200O75643 2136 aaKnown RBP18.79■□□□□ 0.6
USP40-207ENST00000450940 J3QKU1 62 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 PRMT5O14744 637 aaPredicted RBP18.78■□□□□ 0.6
USP40-207ENST00000450940 CREG1O75629 220 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 SCRG1O75711 98 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 AOAHP28039 575 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 NMBRP28336 390 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 KCNAB2Q13303 367 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 SYTL3Q4VX76 610 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 DNAJC21Q5F1R6 531 aaKnown RBP18.78■□□□□ 0.6
USP40-207ENST00000450940 ZNF789Q5FWF6 425 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 SPESP1Q6UW49 350 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 SLC38A9Q8NBW4 561 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 FLVCR1-AS1Q8TAF5 88 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 APOBEC4Q8WW27 367 aaKnown RBP18.78■□□□□ 0.6
USP40-207ENST00000450940 ASZ1Q8WWH4 475 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 PBKQ96KB5 322 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 TSSK1BQ9BXA7 367 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 P2RY12Q9H244 342 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 OR6C2Q9NZP2 312 aa18.78■□□□□ 0.6
USP40-207ENST00000450940 TCRBV7S3A2A0A539 114 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 PIPSLA2A3N6 862 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 SLCO2B1O94956 709 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 KCNJ11Q14654 390 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 DEFB109BQ30KR1 87 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 ATP1A1-AS1Q5TC04 95 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 C16orf46Q6P387 395 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 LDB1Q86U70 411 aaPredicted RBP18.77■□□□□ 0.6
USP40-207ENST00000450940 TMEM126BQ8IUX1 230 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 LKAAEAR1Q8TD35 194 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 OR2A14Q96R47 310 aa18.77■□□□□ 0.6
USP40-207ENST00000450940 FANCEQ9HB96 536 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms