RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 DPH2Q9BQC3 489 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 FAM126AQ9BYI3 521 aaPredicted RBP12.19□□□□□ -0.46
UBE3B-204ENST00000449510 TMCC3Q9ULS5 477 aa12.19□□□□□ -0.46
UBE3B-204ENST00000449510 C17orf102A2RUQ5 167 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 C1QAP02745 245 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 ITIH1P19827 911 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 PIGAP37287 484 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 HNF4AP41235 474 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 AFF1P51825 1210 aaKnown RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 EMX1Q04741 257 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 GTF2H2Q13888 395 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 SOWAHCQ53LP3 525 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 GTF2H2CQ6P1K8 395 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 CHPT1Q8WUD6 406 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 MYDGFQ969H8 173 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 ALPK1Q96QP1 1244 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 NKIRAS2Q9NYR9 191 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 PCDH10Q9P2E7 1040 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 SPEF1Q9Y4P9 236 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 NAV1Q8NEY1 1877 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 A0A096LPI6 279 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 NT5C1B-RDH14C9J2C7 533 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 UGT2B11O75310 529 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 ZNF7P17097 686 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 TNNI3P19429 210 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 C21orf33P30042 268 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 WEE1P30291 646 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 STARD3Q14849 445 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 CLCA4Q14CN2 919 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 NDUFA5Q16718 116 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 PHKG1Q16816 387 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 RFTN2Q52LD8 501 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 ALFQ53S48 1182 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 OR4F3Q6IEY1 312 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 CXCL17Q6UXB2 119 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 TMPRSS11AQ6ZMR5 421 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 DENND1CQ8IV53 801 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 TCAIMQ8N3R3 496 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 MINDY1Q8N5J2 469 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 SH3KBP1Q96B97 665 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 DSN1Q9H410 356 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 VAPAQ9P0L0 249 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 RHCGQ9UBD6 479 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 ZNF222Q9UK12 451 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 UTS2RQ9UKP6 389 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 ERVK-11Q9UQG0 969 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 BCORQ6W2J9 1755 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 NRCAMQ92823 1304 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 FAM240BA0A1B0GVZ2 78 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 PGRP06401 933 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 TNFRSF1BP20333 461 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 LPOP22079 712 aaPredicted RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 ALDH7A1P49419 539 aaKnown RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 RAB15P59190 212 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 CDH18Q13634 790 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 PTPRRQ15256 657 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 TBRG1Q3YBR2 411 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 TIGD5Q53EQ6 642 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 KRT74Q7RTS7 529 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 OR5K1Q8NHB7 308 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 PHF10Q8WUB8 498 aaKnown RBP12.18□□□□□ -0.46
UBE3B-204ENST00000449510 TRIM63Q969Q1 353 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 TP53INP1Q96A56 240 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 C11orf16Q9NQ32 467 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 COMMD3Q9UBI1 195 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 ST3GAL5Q9UNP4 418 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 VPS9D1Q9Y2B5 631 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 PCDHGA11Q9Y5H2 935 aa12.18□□□□□ -0.46
UBE3B-204ENST00000449510 MYL12BO14950 172 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 SUV39H1O43463 412 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 SERPINI2O75830 405 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 BMP4P12644 408 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 ITGALP20701 1170 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CRHBPP24387 322 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CLK3P49761 638 aaKnown RBP12.17□□□□□ -0.46
UBE3B-204ENST00000449510 SNAP47Q5SQN1 464 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 LCN8Q6JVE9 175 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 GLB1LQ6UWU2 654 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CLEC14AQ86T13 490 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 C2orf73Q8N5S3 287 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-204ENST00000449510 ATP13A3Q9H7F0 1226 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 ZNF624Q9P2J8 865 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CCL15-CCL14A0A0B4J2E2 113 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 TBKBP1A7MCY6 615 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 TSPAN9O75954 239 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 S1PR4O95977 384 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 GBAP04062 536 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CKMT1AP12532 417 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 TCF3P15923 654 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 RRM2P31350 389 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 C1DQ13901 141 aaKnown RBP12.17□□□□□ -0.46
UBE3B-204ENST00000449510 QPRTQ15274 297 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 CCL15Q16663 113 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 OR13J1Q8NGT2 312 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 VANGL1Q8TAA9 524 aaPredicted RBP12.17□□□□□ -0.46
UBE3B-204ENST00000449510 RHNO1Q9BSD3 238 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 TRPC4Q9UBN4 977 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 LRFN2Q9ULH4 789 aa12.17□□□□□ -0.46
UBE3B-204ENST00000449510 RNF6Q9Y252 685 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms