RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 DDIASQ8IXT1 998 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 PELI3Q8N2H9 469 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 FBXL6Q8N531 539 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 HTRA1Q92743 480 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 PROX1Q92786 737 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 ABCC13Q9NSE7 274 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 F5P12259 2224 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 ZNF99A8MXY4 864 aaPredicted RBP12.85□□□□□ -0.35
DDX56-206ENST00000446987 G3V2L1 256 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 DPYSL4O14531 572 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 EI24O14681 340 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 SNX2O60749 519 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 NDUFS2O75306 463 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 STC2O76061 302 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 SRP72O76094 671 aaKnown RBP12.85□□□□□ -0.35
DDX56-206ENST00000446987 IGLV3-27P01718 113 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 KLKB1P03952 638 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 MPOP05164 745 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 IRF1P10914 325 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 ACVR2AP27037 513 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 ETFBP38117 255 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 MAPK10P53779 464 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 RPL7AP62424 266 aaKnown RBP12.85□□□□□ -0.35
DDX56-206ENST00000446987 SIGLEC14Q08ET2 396 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 SLC13A2Q13183 592 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 EIF4EBP2Q13542 120 aaPredicted RBP12.85□□□□□ -0.35
DDX56-206ENST00000446987 SQLEQ14534 574 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 POLD3Q15054 466 aaPredicted RBP12.85□□□□□ -0.35
DDX56-206ENST00000446987 EML3Q32P44 896 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 FAM205BPQ63HN1 556 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 STEAP3Q658P3 488 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 REP15Q6BDI9 236 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 DNAJC24Q6P3W2 148 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 BEND5Q7L4P6 421 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 HDDC2Q7Z4H3 204 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 MIB1Q86YT6 1006 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 CCDC103Q8IW40 242 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 TBC1D21Q8IYX1 336 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 PSD4Q8NDX1 1056 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 RNF170Q96K19 258 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 LINC00597Q9H2U6 94 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 WDR55Q9H6Y2 383 aaPredicted RBP12.85□□□□□ -0.35
DDX56-206ENST00000446987 RPRD1BQ9NQG5 326 aaKnown RBP12.85□□□□□ -0.35
DDX56-206ENST00000446987 POLE4Q9NR33 117 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 RAB6BQ9NRW1 208 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 ASNSD1Q9NWL6 643 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 SFMBT1Q9UHJ3 866 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 DNMT3LQ9UJW3 386 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 OAZ3Q9UMX2 235 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 CFL2Q9Y281 166 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 SNX5Q9Y5X3 404 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 PMF1-BGLAPU3KQ54 211 aa12.85□□□□□ -0.35
DDX56-206ENST00000446987 BBIP1A8MTZ0 92 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 DLL1O00548 723 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 SLC9A3R1O14745 358 aaPredicted RBP12.84□□□□□ -0.35
DDX56-206ENST00000446987 GRAP2O75791 330 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 TRIM16O95361 564 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 HPRP00739 348 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 MLNP12872 115 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 FOSL1P15407 271 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 CD1EP15812 388 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 HADHAP40939 763 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 SLC9A3P48764 834 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 SLC6A3Q01959 620 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 PRKCDQ05655 676 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 SEMA5AQ13591 1074 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 RBM20Q5T481 1227 aaKnown RBP12.84□□□□□ -0.35
DDX56-206ENST00000446987 OR6B2Q6IFH4 312 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 LRRC8EQ6NSJ5 796 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 TRMT10BQ6PF06 316 aaKnown RBP12.84□□□□□ -0.35
DDX56-206ENST00000446987 CCBE1Q6UXH8 406 aaPredicted RBP12.84□□□□□ -0.35
DDX56-206ENST00000446987 TAC4Q86UU9 113 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 SNX29P2Q8IUI4 249 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 OFCC1Q8IZS5 231 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 PSMA8Q8TAA3 256 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 PIK3R3Q92569 461 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 DNASE1L2Q92874 299 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 FAM149B1Q96BN6 582 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 REXO5Q96IC2 774 aaKnown RBP12.84□□□□□ -0.35
DDX56-206ENST00000446987 ELMO2Q96JJ3 720 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 KCTD14Q9BQ13 255 aaPredicted RBP12.84□□□□□ -0.35
DDX56-206ENST00000446987 SLC25A23Q9BV35 468 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 SLIRPQ9GZT3 109 aaKnown RBP12.84□□□□□ -0.35
DDX56-206ENST00000446987 EPS8L2Q9H6S3 715 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 BRD9Q9H8M2 597 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 HEBP1Q9NRV9 189 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 DDX28Q9NUL7 540 aaKnown RBP12.84□□□□□ -0.35
DDX56-206ENST00000446987 OXSMQ9NWU1 459 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 GTSE1Q9NYZ3 720 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 MARCH2Q9P0N8 246 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 ACTR3BQ9P1U1 418 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 VPS4AQ9UN37 437 aa12.84□□□□□ -0.35
DDX56-206ENST00000446987 A0A1W2PQ72 361 aa12.83□□□□□ -0.36
DDX56-206ENST00000446987 E2F8A0AVK6 867 aa12.83□□□□□ -0.36
DDX56-206ENST00000446987 MRPS14O60783 128 aaKnown RBP12.83□□□□□ -0.36
DDX56-206ENST00000446987 TFEBP19484 476 aa12.83□□□□□ -0.36
DDX56-206ENST00000446987 TFE3P19532 575 aaPredicted RBP12.83□□□□□ -0.36
DDX56-206ENST00000446987 PCMT1P22061 227 aa12.83□□□□□ -0.36
DDX56-206ENST00000446987 UGT2B10P36537 528 aa12.83□□□□□ -0.36
DDX56-206ENST00000446987 SCNN1AP37088 669 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms