RNA–Protein interactions for RNA: ENST00000445329.5

TRIM6-205, Transcript of tripartite motif containing 6, human

TSL 1 (best) BASIC

Gene TRIM6, Length 2,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM6-205	ENST00000445329	AP2M1	Q96CW1	435 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	MYO19	Q96H55	970 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	C14orf144	Q96I85	54 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	ELMO2	Q96JJ3	720 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	OR5M11	Q96RB7	305 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	DGCR6L	Q9BY27	220 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	MAGEF1	Q9HAY2	307 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	SDHAF2	Q9NX18	166 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	CD300A	Q9UGN4	299 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	SARDH	Q9UL12	918 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	RNF24	Q9Y225	148 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	PCDHB5	Q9Y5E4	795 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329		U3KQ87	197 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	YDJC	A8MPS7	323 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329		A8MXE2	369 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	WDR64	B1ANS9	1081 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	ARNTL	O00327	626 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	DDX3Y	O15523	660 aa	Known RBP	6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	WBP4	O75554	376 aa	Known RBP	6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	ZMPSTE24	O75844	475 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	DIRAS3	O95661	229 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	MPO	P05164	745 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	FOSL2	P15408	326 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	AOC1	P19801	751 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	MYF6	P23409	242 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	BMI1	P35226	326 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	CDH4	P55283	916 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	BCAR1	P56945	870 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	CSTF1	Q05048	431 aa	Known RBP	6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	SEMA3B	Q13214	749 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	GPR17	Q13304	367 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	BCL7A	Q4VC05	210 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	ZNF805	Q5CZA5	627 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	MIIP	Q5JXC2	388 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	PMF1	Q6P1K2	205 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	TAF2	Q6P1X5	1199 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	RASSF6	Q6ZTQ3	369 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	TRIM22	Q8IYM9	498 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	OFCC1	Q8IZS5	231 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	FAM26E	Q8N5C1	309 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	PLA2G15	Q8NCC3	412 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	CYGB	Q8WWM9	190 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	BAP1	Q92560	729 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	BSCL2	Q96G97	398 aa	Predicted RBP	6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	TRMO	Q9BU70	441 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	METTL9	Q9H1A3	318 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	INTS10	Q9NVR2	710 aa	Known RBP	6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	DPP3	Q9NY33	737 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	H2AFY2	Q9P0M6	372 aa	Predicted RBP	6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	COX16	Q9P0S2	106 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	NDRG3	Q9UGV2	375 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	ELF5	Q9UKW6	265 aa	Predicted RBP	6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	SRPRB	Q9Y5M8	271 aa	Known RBP	6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	ALG5	Q9Y673	324 aa		6.69	□□□□□ -1.34
TRIM6-205	ENST00000445329	MICAL3	Q7RTP6	2002 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	KIAA1217	Q5T5P2	1943 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	KLF18	A0A0U1RQI7	1052 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	LOC100653049	A0A140TA62	436 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	MROH6	A6NGR9	719 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329		B4E171	279 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	SMLR1	H3BR10	107 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329		M0QYV0	167 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329		M0QZ92	97 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CDC7	O00311	574 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TOX3	O15405	576 aa	Predicted RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	UGDH	O60701	494 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	KERA	O60938	352 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	KRT34	O76011	436 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	SCAF4	O95104	1147 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	NUDT7	P0C024	238 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ACSM4	P0C7M7	580 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CBR1	P16152	277 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CHRNB2	P17787	502 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	RAB3B	P20337	219 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	RPS3	P23396	243 aa	Known RBP eCLIP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	PRDX5	P30044	214 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	KCNJ3	P48549	501 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ARSF	P54793	590 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	CDH13	P55290	713 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	RBP5	P82980	135 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	C17orf67	Q0P5P2	114 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	GRIN2C	Q14957	1233 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	C2CD6	Q53TS8	623 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	MTX3	Q5HYI7	312 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	NHSL2	Q5HYW2	709 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	INTS11	Q5TA45	600 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	LAMTOR1	Q6IAA8	161 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	TIGD7	Q6NT04	549 aa	Predicted RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	MZT2B	Q6NZ67	158 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ZBTB49	Q6ZSB9	765 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	NRARP	Q7Z6K4	114 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ADGRA1	Q86SQ6	560 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	RETREG3	Q86VR2	466 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	ANKRD46	Q86W74	232 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	PCDH20	Q8N6Y1	951 aa	Known RBP	6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	NANOGP1	Q8N7R0	232 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	BEST2	Q8NFU1	509 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	C5orf34	Q96MH7	638 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	NEDD4L	Q96PU5	975 aa		6.68	□□□□□ -1.34
TRIM6-205	ENST00000445329	AGAP2	Q99490	1192 aa		6.68	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 30 ms