RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ELOCQ15369 112 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 SNAPC1Q16533 368 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 ZIK1Q3SY52 487 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 TNFRSF25Q93038 417 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 NKD2Q969F2 451 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 NMD3Q96D46 503 aaKnown RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.04□□□□□ -0.64
FN1-211ENST00000443816 C8orf33Q9H7E9 229 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 SPIN1Q9Y657 262 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 ATXN2Q99700 1313 aaKnown RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 AKAP8O43823 692 aaKnown RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 TRIM3O75382 744 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 F2P00734 622 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 HNRNPA1P09651 372 aaKnown RBP eCLIP11.04□□□□□ -0.643e-7■□□□□ 8.3
FN1-211ENST00000443816 ATP1B2P14415 290 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 RAB2AP61019 212 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 DLG1Q12959 904 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 ZNF311Q5JNZ3 666 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 PRSS58Q8IYP2 241 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 Q8N9G6 341 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 SIDT2Q8NBJ9 832 aaKnown RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 P2RY13Q9BPV8 354 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 FAM83CQ9BQN1 747 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 OSBPL11Q9BXB4 747 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 ARID1BQ8NFD5 2236 aaPredicted RBP11.04□□□□□ -0.64
FN1-211ENST00000443816 CCDC88CQ9P219 2028 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 BCAP31P51572 246 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 NCBP2P52298 156 aaKnown RBP eCLIP11.04□□□□□ -0.64
FN1-211ENST00000443816 VBP1P61758 197 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 MYLK3Q32MK0 819 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 SLC9B1Q4ZJI4 515 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 PRAMEF14Q5SWL7 426 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 PRAMEF13Q5VWM6 474 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 ANO7Q6IWH7 933 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 TMEM126BQ8IUX1 230 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 SLC38A4Q969I6 547 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 C8orf48Q96LL4 319 aa11.04□□□□□ -0.64
FN1-211ENST00000443816 K7EPI3 171 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 DCLK1O15075 740 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 ADAMDEC1O15204 470 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 IDH3BO43837 385 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 IFNA6P05013 189 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 PTPN5P54829 565 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 MED22Q15528 200 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 PYDC2Q56P42 97 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 HPS6Q86YV9 775 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 CMTR2Q8IYT2 770 aaKnown RBP11.03□□□□□ -0.64
FN1-211ENST00000443816 PYROXD2Q8N2H3 581 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 OR2AP1Q8NGE2 309 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 SLC32A1Q9H598 525 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 ACSL5Q9ULC5 683 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 MED31Q9Y3C7 131 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 TRAPPC6AO75865 159 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 IFNW1P05000 195 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 GNALP38405 381 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 CLCNKAP51800 687 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 LIMK2P53671 638 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 NDUFA5Q16718 116 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 NAIF1Q69YI7 327 aaPredicted RBP11.03□□□□□ -0.64
FN1-211ENST00000443816 RASGEF1CQ8N431 466 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 HAVCR1Q96D42 359 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 GPATCH1Q9BRR8 931 aaKnown RBP11.03□□□□□ -0.64
FN1-211ENST00000443816 FKBPLQ9UIM3 349 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 ATG2BQ96BY7 2078 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 A0A1B0GUL6 1792 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 NR2C1P13056 603 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 DMPKQ09013 629 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 ENPP2Q13822 863 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 IL23RQ5VWK5 629 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 CLVS1Q8IUQ0 354 aaPredicted RBP11.03□□□□□ -0.64
FN1-211ENST00000443816 PSKH2Q96QS6 385 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 GATBO75879 557 aaKnown RBP11.03□□□□□ -0.64
FN1-211ENST00000443816 SLC26A3P40879 764 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 CPNE9Q8IYJ1 553 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 MREGQ8N565 214 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 PLA2G15Q8NCC3 412 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 DNAJB8Q8NHS0 232 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 SNX33Q8WV41 574 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 RAB7BQ96AH8 199 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 RETREG1Q9H6L5 497 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 MOCS1Q9NZB8 636 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 EHD3Q9NZN3 535 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 EGFL7Q9UHF1 273 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 DAPK2Q9UIK4 370 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 PAPSS2O95340 614 aaPredicted RBP11.03□□□□□ -0.64
FN1-211ENST00000443816 PIGRP01833 764 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 TAF5Q15542 800 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 DNM1P34Q6PK57 102 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 CRYBG2Q8N1P7 616 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 FBXW8Q8N3Y1 598 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 COX4I2Q96KJ9 171 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 KXD1Q9BQD3 176 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 EBF3Q9H4W6 596 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 IGSF9Q9P2J2 1179 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 FAM221BA6H8Z2 402 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 GABRDO14764 452 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 SOCS5O75159 536 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 ALPPP05187 535 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 AQP1P29972 269 aa11.03□□□□□ -0.64
FN1-211ENST00000443816 CTSKP43235 329 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms