RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 AKT1P31749 480 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 GABRA4P48169 554 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 SRSF11Q05519 484 aaKnown RBP13.43□□□□□ -0.26
LINC00642-202ENST00000442515 SLC10A2Q12908 348 aaPredicted RBP13.43□□□□□ -0.26
LINC00642-202ENST00000442515 PIGHQ14442 188 aaPredicted RBP13.43□□□□□ -0.26
LINC00642-202ENST00000442515 PCM1Q15154 2024 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 ZIC1Q15915 447 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.43□□□□□ -0.26
LINC00642-202ENST00000442515 DAAM2Q86T65 1068 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 TRIM73Q86UV7 250 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 NT5DC3Q86UY8 548 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 ANKRD20A12PQ8NF67 263 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 DTX3LQ8TDB6 740 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 CPLX3Q8WVH0 158 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 TADA1Q96BN2 335 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 BTBD6Q96KE9 485 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 SRPK1Q96SB4 655 aaKnown RBP13.43□□□□□ -0.26
LINC00642-202ENST00000442515 NDC1Q9BTX1 674 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 ACTR10Q9NZ32 417 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 FER1L5A0AVI2 2057 aa13.43□□□□□ -0.26
LINC00642-202ENST00000442515 GLYATL1P3A0A0U1RQE8 302 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 C2orf74A8MZ97 194 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 GAPDHSO14556 408 aaPredicted RBP13.42□□□□□ -0.26
LINC00642-202ENST00000442515 POLBP06746 335 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 MYBL1P10243 752 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 GZMAP12544 262 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 MSH3P20585 1137 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 MST1P26927 711 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 TNFSF10P50591 281 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 ART1P52961 327 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 TMPRSS15P98073 1019 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 UBXN1Q04323 297 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 NOMO1Q15155 1222 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 TUBB8Q3ZCM7 444 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 ZDHHC20Q5W0Z9 365 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 SPESP1Q6UW49 350 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 ZNF571Q7Z3V5 609 aaPredicted RBP13.42□□□□□ -0.26
LINC00642-202ENST00000442515 NIPA2Q8N8Q9 360 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 OR52E1Q8NGJ3 308 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 ENOX1Q8TC92 643 aaKnown RBP13.42□□□□□ -0.26
LINC00642-202ENST00000442515 FKBP10Q96AY3 582 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 TRIM11Q96F44 468 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 RBM41Q96IZ5 413 aaKnown RBP13.42□□□□□ -0.26
LINC00642-202ENST00000442515 ERGIC2Q96RQ1 377 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 LMF1Q96S06 567 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 SPSB2Q99619 263 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 SPOCK3Q9BQ16 436 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 ZNF670Q9BS34 389 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 TMUB1Q9BVT8 246 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 MRM3Q9HC36 420 aaKnown RBP13.42□□□□□ -0.26
LINC00642-202ENST00000442515 SMOXQ9NWM0 555 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 IRAK4Q9NWZ3 460 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 SEC14L3Q9UDX4 400 aa13.42□□□□□ -0.26
LINC00642-202ENST00000442515 TRAV17A0A0B4J275 112 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 KLHL33A6NCF5 533 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 DDX3XO00571 662 aaKnown RBP eCLIP13.41□□□□□ -0.26
LINC00642-202ENST00000442515 CLDN14O95500 239 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 CD99P14209 185 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 ITGAXP20702 1163 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 GJC1P36383 396 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 SMSP52788 366 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 CASP6P55212 293 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 UBE2HP62256 183 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 PPIDQ08752 370 aaKnown RBP13.41□□□□□ -0.26
LINC00642-202ENST00000442515 ITGA9Q13797 1035 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 BCL7AQ4VC05 210 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 CCDC70Q6NSX1 233 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 TLDC1Q6P9B6 456 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 HOOK3Q86VS8 718 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 AMIGO1Q86WK6 493 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 CFAP206Q8IYR0 622 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 ADGRF3Q8IZF5 1079 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 PQLC3Q8N755 202 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 OR11G2Q8NGC1 345 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 SPATA22Q8NHS9 363 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.41□□□□□ -0.26
LINC00642-202ENST00000442515 LINC00615Q96LM1 132 aaPredicted RBP13.41□□□□□ -0.26
LINC00642-202ENST00000442515 ZNF830Q96NB3 372 aaPredicted RBP13.41□□□□□ -0.26
LINC00642-202ENST00000442515 FERD3LQ96RJ6 166 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 SLC25A51Q9H1U9 297 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 TFB2MQ9H5Q4 396 aaKnown RBP13.41□□□□□ -0.26
LINC00642-202ENST00000442515 XKR8Q9H6D3 395 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 HAUS4Q9H6D7 363 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 IL17CQ9P0M4 197 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 ABI3Q9P2A4 366 aa13.41□□□□□ -0.26
LINC00642-202ENST00000442515 DYTNA2CJ06 578 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 SLC19A2O60779 497 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 SSR1P43307 286 aaKnown RBP13.4□□□□□ -0.26
LINC00642-202ENST00000442515 RBPJQ06330 500 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 SLC14A2Q15849 920 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 RBBP7Q16576 425 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 C3AR1Q16581 482 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 NKG7Q16617 165 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 ATP13A4Q4VNC1 1196 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 CT47A1Q5JQC4 288 aaPredicted RBP13.4□□□□□ -0.26
LINC00642-202ENST00000442515 FAAH2Q6GMR7 532 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 SARM1Q6SZW1 724 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 SHISA6Q6ZSJ9 500 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 COX15Q7KZN9 410 aa13.4□□□□□ -0.26
LINC00642-202ENST00000442515 FAM20CQ8IXL6 584 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms