RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 GRM5P41594 1212 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 HNMTP50135 292 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MAP2K6P52564 334 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PLA2G16P53816 162 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MLLT10P55197 1068 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GCNT1Q02742 428 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GPS1Q13098 491 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RPA4Q13156 261 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 IL18R1Q13478 541 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 FGFBP1Q14512 234 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MFSD13AQ14CX5 517 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SEC23BQ15437 767 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 AANATQ16613 207 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 HIF1AQ16665 826 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 HIST2H2ACQ16777 129 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PTPN20Q4JDL3 420 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 NOMO2Q5JPE7 1267 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ATAT1Q5SQI0 421 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TPRG1LQ5T0D9 272 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 OTUD3Q5T2D3 398 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 CCNJQ5T5M9 372 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ETFRF1Q6IPR1 90 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TAF2Q6P1X5 1199 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ARHGAP11AQ6P4F7 1023 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 KIAA1324Q6UXG2 1013 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 RRM2BQ7LG56 351 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 NIPA1Q7RTP0 329 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TDRPQ86YL5 185 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 KCT2Q8NC54 265 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 C11orf65Q8NCR3 313 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 OR6Q1Q8NGQ2 317 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RHOXF1Q8NHV9 184 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PIWIL2Q8TC59 973 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZFAND1Q8TCF1 268 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 UTP15Q8TED0 518 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 RBPMSQ93062 196 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PTP4A1Q93096 173 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.73□□□□□ -1.97
LIG4-203ENST00000442234 RAD51AP1Q96B01 352 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF597Q96LX8 424 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SERPINB11Q96P15 392 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RPRD1AQ96P16 312 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF251Q9BRH9 671 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TBCDQ9BTW9 1192 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 LHPPQ9H008 270 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP2.73□□□□□ -1.979e-8■■■■■ 29.3
LIG4-203ENST00000442234 OSBPL2Q9H1P3 480 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PNPLA8Q9NP80 782 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 NGRNQ9NPE2 291 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 DCP1AQ9NPI6 582 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 SMOXQ9NWM0 555 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 EIF3KQ9UBQ5 218 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 CHORDC1Q9UHD1 332 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 GPN3Q9UHW5 284 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 EIF2B4Q9UI10 523 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PCDHB12Q9Y5F1 795 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SLIT3O75094 1523 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 A0A1B0GV90 55 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 A0A1B0GW55 424 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ATP6AP2A0A1C7CYW4 349 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 FAM149AA5PLN7 773 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SHISA7A6NL88 538 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PP2D1A8MPX8 630 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 LAD1O00515 517 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TXNL1O43396 289 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 AKR7A2O43488 359 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 LAMTOR5O43504 91 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TYROBPO43914 113 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ADAMTS4O75173 837 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 LYPLA1O75608 230 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 LYPLA2O95372 231 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 RECKO95980 971 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TMEM253P0C7T8 217 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZDHHC11BP0C7U3 371 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 ZNF865P0CJ78 1059 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 DUX4L2P0CJ85 424 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DUX4L3P0CJ86 424 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DUX4L4P0CJ87 422 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DUX4L5P0CJ88 424 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DUX4L6P0CJ89 424 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 DUX4L7P0CJ90 424 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CKBP12277 381 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SPNP16150 400 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 TFE3P19532 575 aaPredicted RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 COMTP21964 271 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 PTAFRP25105 342 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 GDI1P31150 447 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SFNP31947 248 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 SOX6P35712 828 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 EIF2DP41214 584 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 GRIA1P42261 906 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 QARSP47897 775 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 PREPP48147 710 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MARCKSL1P49006 195 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 HLCSP50747 726 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 CLCN4P51793 760 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MAZP56270 477 aaKnown RBP2.73□□□□□ -1.97
LIG4-203ENST00000442234 CARD18P57730 90 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 FGL1Q08830 312 aa2.73□□□□□ -1.97
LIG4-203ENST00000442234 MAB21L1Q13394 359 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms