RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 AGXTP21549 392 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 PDHA2P29803 388 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 FDFT1P37268 417 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 CDKN1CP49918 316 aaPredicted RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 CCL11P51671 97 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 CDH17Q12864 832 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 ABRQ12979 859 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 PRKG2Q13237 762 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 MSLNQ13421 630 aaPredicted RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 IL10RAQ13651 578 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 BOP1Q14137 746 aaKnown RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 COLEC12Q5KU26 742 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 KCTD11Q693B1 232 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 AFTPHQ6ULP2 937 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 PACS1Q6VY07 963 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 SYTL1Q8IYJ3 562 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 DSELQ8IZU8 1212 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 CLDN19Q8N6F1 224 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 ENDOVQ8N8Q3 282 aaKnown RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 PHC3Q8NDX5 983 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 COL26A1Q96A83 441 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 CDKN2AIPNLQ96HQ2 116 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 PPM1MQ96MI6 270 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 RUFY1Q96T51 708 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 DPH2Q9BQC3 489 aaPredicted RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 NLNQ9BYT8 704 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 PITPNM3Q9BZ71 974 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 XKR8Q9H6D3 395 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 PIH1D1Q9NWS0 290 aaKnown RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 IRAK4Q9NWZ3 460 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 ACTR10Q9NZ32 417 aa11.42□□□□□ -0.58
TTC28-203ENST00000442232 TDRKHQ9Y2W6 561 aaKnown RBP11.42□□□□□ -0.58
TTC28-203ENST00000442232 FLNCQ14315 2725 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 HEATR9A2RTY3 570 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 BTN3A3O00478 584 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 IFNB1P01574 187 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 PRSS56P0CW18 603 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 PTGIRP43119 386 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 RRADP55042 308 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 CHAF1BQ13112 559 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 UBAP2LQ14157 1087 aaKnown RBP11.41□□□□□ -0.58
TTC28-203ENST00000442232 BRD3Q15059 726 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 PLEKHS1Q5SXH7 462 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 CPZQ66K79 652 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 SPESP1Q6UW49 350 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 RAB43Q86YS6 212 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 TBC1D21Q8IYX1 336 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 C19orf47Q8N9M1 422 aaKnown RBP11.41□□□□□ -0.58
TTC28-203ENST00000442232 OR1L3Q8NH93 324 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 TRAPPC9Q96Q05 1148 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 FRMD8P1Q9BZ68 369 aaPredicted RBP11.41□□□□□ -0.58
TTC28-203ENST00000442232 KLHL25Q9H0H3 589 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 ING2Q9H160 280 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 AKIRIN1Q9H9L7 192 aaPredicted RBP11.41□□□□□ -0.58
TTC28-203ENST00000442232 GPN3Q9UHW5 284 aaPredicted RBP11.41□□□□□ -0.58
TTC28-203ENST00000442232 TCFL5Q9UL49 500 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 PLAAQ9Y263 795 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 R3HDM2Q9Y2K5 976 aaKnown RBP11.41□□□□□ -0.58
TTC28-203ENST00000442232 ZNF451Q9Y4E5 1061 aa11.41□□□□□ -0.58
TTC28-203ENST00000442232 PCDHGA9Q9Y5G4 932 aaKnown RBP11.41□□□□□ -0.58
TTC28-203ENST00000442232 TTLL8A6PVC2 850 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 VPS4BO75351 444 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 TMEM63AO94886 807 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 RPN2P04844 631 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 PVRP15151 417 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 STIP1P31948 543 aaKnown RBP11.4□□□□□ -0.58
TTC28-203ENST00000442232 GDF10P55107 478 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 PRAMEP78395 509 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 KLF1Q13351 362 aaPredicted RBP11.4□□□□□ -0.58
TTC28-203ENST00000442232 TMED2Q15363 201 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 CCDC38Q502W7 563 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 FASTKD1Q53R41 847 aaKnown RBP11.4□□□□□ -0.58
TTC28-203ENST00000442232 AARS2Q5JTZ9 985 aaKnown RBP11.4□□□□□ -0.58
TTC28-203ENST00000442232 ZNF517Q6ZMY9 492 aaPredicted RBP11.4□□□□□ -0.58
TTC28-203ENST00000442232 NLRP9Q7RTR0 991 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 PIANPQ8IYJ0 282 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 ADGRF3Q8IZF5 1079 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 CCDC89Q8N998 374 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 OR52K1Q8NGK4 314 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 OR5AR1Q8NGP9 310 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 GSDMBQ8TAX9 411 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 SLC35B2Q8TB61 432 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 MIB2Q96AX9 1013 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 TCTN2Q96GX1 697 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 DESI2Q9BSY9 194 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 DHRS4Q9BTZ2 278 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 TRIM55Q9BYV6 548 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 TSGA10Q9BZW7 698 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 RBSNQ9H1K0 784 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 TXLNGQ9NUQ3 528 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 PCMTD2Q9NV79 361 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 ANKMY1Q9P2S6 941 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 IMPACTQ9P2X3 320 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 ANAPC5Q9UJX4 755 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 VPS4AQ9UN37 437 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 ICKQ9UPZ9 632 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 ZNF148Q9UQR1 794 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 PCDHGB7Q9Y5F8 929 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 AP1M2Q9Y6Q5 423 aa11.4□□□□□ -0.58
TTC28-203ENST00000442232 LRRK2Q5S007 2527 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms