RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 KLHL42Q9P2K6 505 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 SLC23A2Q9UGH3 650 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 TRMT6Q9UJA5 497 aaKnown RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 GRID1Q9ULK0 1009 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 PNMA8BQ9ULN7 279 aaPredicted RBP6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 GPR34Q9UPC5 381 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 CDYLQ9Y232 598 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 PRUNE2Q8WUY3 3088 aa6.9□□□□□ -1.3
LSM3P3-201ENST00000436601 MYO18AQ92614 2054 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 A0A1W2PR77 199 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 SLC5A10A0PJK1 596 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 GPR89AB7ZAQ6 455 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 LINC01387J3KSC0 135 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 CACNB4O00305 520 aaPredicted RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 CDC7O00311 574 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 QSOX1O00391 747 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 TOR1BO14657 336 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 KPNA5O15131 536 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 TM9SF1O15321 606 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 GRID2O43424 1007 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 ZBTB14O43829 449 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 MAGEC1O60732 1142 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 GPC4O75487 556 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 SLCO2B1O94956 709 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 FTH1P02794 183 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 GPR89BP0CG08 455 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 DHRS4L1P0CG22 281 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 TFEBP19484 476 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 CD27P26842 260 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 MAOBP27338 520 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 AVPR2P30518 371 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 GLRBP48167 497 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 IL2P60568 153 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 YPEL5P62699 121 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 IRX4P78413 519 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 GTF2H3Q13889 308 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 NFATC4Q14934 902 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 ACAP2Q15057 778 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 OR4D1Q15615 310 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 PYCR3Q53H96 274 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 TMEM201Q5SNT2 666 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 AGAP9Q5VTM2 703 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 LRRC8EQ6NSJ5 796 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 LRFN4Q6PJG9 635 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 LVRNQ6Q4G3 990 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 KYAT3Q6YP21 454 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 FAM83HQ6ZRV2 1179 aaPredicted RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 OTOAQ7RTW8 1153 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 PIWIL4Q7Z3Z4 852 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 TBC1D1Q86TI0 1168 aaPredicted RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 ISCA2Q86U28 154 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 TRAPPC5Q8IUR0 188 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 VRK3Q8IV63 474 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 SLC22A18ASQ8N1D0 253 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 FSTL5Q8N475 847 aaPredicted RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 NKAPQ8N5F7 415 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 ARFGAP2Q8N6H7 521 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 OR56A4Q8NGH8 313 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 MGARPQ8TDB4 240 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 OR1E3Q8WZA6 343 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 SNX19Q92543 992 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 ELMO1Q92556 727 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 NELL1Q92832 810 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 PTERQ96BW5 349 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 LINGO1Q96FE5 620 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 PDLIM5Q96HC4 596 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 ZNF514Q96K75 400 aaPredicted RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 HSPA12BQ96MM6 686 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 SLC6A18Q96N87 628 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 TSSK1BQ9BXA7 367 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 DERL2Q9GZP9 239 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 DUSP15Q9H1R2 295 aaPredicted RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 CCDC86Q9H6F5 360 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 CNOT10Q9H9A5 744 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 RMI1Q9H9A7 625 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 NMRAL1Q9HBL8 299 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 FGF22Q9HCT0 170 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 MRPL40Q9NQ50 206 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 GPR27Q9NS67 375 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 TM7SF3Q9NS93 570 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 NKIRAS1Q9NYS0 192 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 REV1Q9UBZ9 1251 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 EIF2B4Q9UI10 523 aaKnown RBP6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 ADAM30Q9UKF2 790 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 FBXO4Q9UKT5 387 aa6.89□□□□□ -1.31
LSM3P3-201ENST00000436601 C17orf113A0A1B0GUU1 675 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 NPEPPSL1A6NEC2 478 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 MGAT4DA6NG13 374 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 PRR19A6NJB7 356 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 A6NNZ2 444 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 MEI4A8MW99 385 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 F8W8V4 182 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 G3V2L1 256 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 TNFRSF10CO14798 259 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 KMOO15229 486 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 WNT1P04628 370 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 APOA4P06727 396 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 GSTM1P09488 218 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 CBSLP0DN79 551 aa6.88□□□□□ -1.31
LSM3P3-201ENST00000436601 EPXP11678 715 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms